Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1423 ATGGAGAACGTTGGAGGAGGTTCGTCTTCGAACAACGACAACAGCGGAATCAAGGAGCAGGACAGTTTGTTGCCGATAGCGAATGTTGGTCGGATCATGAAGCAGATACTGCCTCAGAACGCCAAGATATCCAAGGAAGGGAAGGAGACCATGCAGGAATGCGTGTCGGAGTTCATAAGCTTCGTGACCAGCGAGGCGTCGGAGAAGTGCCGGAAGGAGAGGAGGAAGACGGTGAATGGGGATGACATATGCTGGGCCTTGGCTACGCTTGGTTTTGATGACTCTGCCGACCCACTGAGGAGGTACCTGCACAGATTTAGAGAGTTAGAGTTTGACAGAGCTAACCATGACAGAGGAAATAGCCCTCACGACAGGGATGACCTCTATCAAATTCCCTCCACAGGAATCAGGCACTGA 417 0.518 MENVGGGSSSNNDNSGIKEQDSLLPIANVGRIMKQILPQNAKISKEGKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALATLGFDDSADPLRRYLHRFRELEFDRANHDRGNSPHDRDDLYQIPSTGIRH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1423 138 SUPERFAMILY Histone-fold 20 124 IPR009072 GO:0046982
Lele17g1423 138 MobiDBLite consensus disorder prediction 114 138 - -
Lele17g1423 138 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele17g1423 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 87 IPR003958 -
Lele17g1423 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele17g1423 138 Gene3D Histone, subunit A 10 131 IPR009072 GO:0046982
Lele17g1423 138 FunFam Nuclear transcription factor Y subunit B-6 12 127 - -
Lele17g1423 138 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Lele17g1423 138 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Lele17g1423 138 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1423 Lele-ChrLele17 23156565 23156981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1423 17 127 CCAAT-HAP3 Transcription Factor Family AT2G47810 71.171 4.55e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele17g1423 CBFD_NFYB_HMF 2.2e-26 CL0012