Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1418 ATGCACAGCAATGTTGTTGATTTCAATCCTTTCTTAACATACGAATCAATCAATCAACCAACTGAGATCAGGGGTGCTTATCGGATGGAGATGGACTACGCGACGGAGTTTCCTCACTCTCATTTGGATCGACGTCCCAGGAAAAGGGCTAAATTAGCCTGGGAATTTCCTCAAACACACTCCCAGGCTTATTCAGGGATGTGTTATGGACAAGAGGTTGGAAATATGACAAGCTTTGGAGCAACAAGGATACTTCCTGATCACGCTGGCCTATTTGTGAAGGGGTTGGCTGAAAAGGGTTCTCCCCCATGGAGGGATGATGACAAAGATGGACATTACATGTTTGCACTTGGTGACAATTTAACACCTCGATATAAGATCCTTCAAAAAATTGGTGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCTATAAAGGTTGTTCGAAGTACTAAGAAATATCGTGATGCAGCAAAGGTAGAAGTTGATGTCCTTCAGTTACTTGTGAAGTATGACAGGATTGGCAGTCGCTGTGTTCAAATACGGAACTGGTTCGACTATCGAAACCATATCTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACGGAAGAACAATTATGGCCCATTTCCGGTTGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGTCTCATCCACACCGACTTGAAGCCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTACAAGGTTACATCCCGGACAACAAAAGAAGGAACCTTCTATAAGAGATTGCCAAAGTCAAGTGCTATCAAGGTCATTGACTTTGGCAGCACAGCCTATGAGCACCAAGATCACAACTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGACTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTAGGCCCAATGCCTGTGCACATGTTGAAAAGAGCAGACCGGCATGCGGAGAAGTTTATAAGAAGGAGTAGACTGAACTGGCCAGAAGGGGCAGTCTCTCGAGAAAGTATCAAGGCTGTATTGAAACTACCACGTCTTCCTAATCTAGTAATACAGCATGTGGATCACTCTGCAGGGGATCTAATTGATCTCTTGCAAGGTCTTCTTCGTTTTGATCCCTCCAGTAGATTGACAGCTCATGAGGCGCTCCGGCATCCCTTCTTTACAAAGGAGCATTACCGGAGATTTTGA 1383 0.4418 MHSNVVDFNPFLTYESINQPTEIRGAYRMEMDYATEFPHSHLDRRPRKRAKLAWEFPQTHSQAYSGMCYGQEVGNMTSFGATRILPDHAGLFVKGLAEKGSPPWRDDDKDGHYMFALGDNLTPRYKILQKIGEGTFGQVLECWDREMRVLVAIKVVRSTKKYRDAAKVEVDVLQLLVKYDRIGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYGPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYVKVPDYKVTSRTTKEGTFYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPVHMLKRADRHAEKFIRRSRLNWPEGAVSRESIKAVLKLPRLPNLVIQHVDHSAGDLIDLLQGLLRFDPSSRLTAHEALRHPFFTKEHYRRF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1418 460 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Lele17g1418 460 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 30 455 - -
Lele17g1418 460 SMART serkin_6 125 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1418 460 ProSiteProfiles Protein kinase domain profile. 125 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1418 460 Pfam Protein kinase domain 125 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1418 460 FunFam Serine/threonine-protein kinase AFC2 201 452 - -
Lele17g1418 460 Gene3D Transferase(Phosphotransferase) domain 1 179 452 - -
Lele17g1418 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Lele17g1418 460 Gene3D Phosphorylase Kinase; domain 1 112 205 - -
Lele17g1418 460 CDD PKc_CLK 112 452 - -
Lele17g1418 460 SUPERFAMILY Protein kinase-like (PK-like) 112 456 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1418 Lele-ChrLele17 23128230 23132557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1418 128 456 MAP Kinase Gene Family AT4G01370 28.955 4.35e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele17g1418 Pkinase 5.2e-49 CL0016