Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1412 ATGGCCACCTGTTCCTCACTTTTACCTGACACTCATGATTCTTCCTCTTTGAAGCGGAAGAGACCCCTCAATATTCAGATCCCAGACGTCTTGCGAGAAATCCAGATACCCAAGCTTAATGATTCCAAGGCATTGAAGGACAACGTTTCTCTCAGCGGAATTGGCTTTGGGGTTTTTTCTGTAAAAGGCAAGAAATCGTGCATGGAAGATGCTCACAAGATTGTTTCTTCTTTAGAGAGCAACCCAAAAAAAGGCTTTTTTGGGGTCTACGATGGGCATGGCGGCAGGAAGGCCGCAGAGTTTGTAGTTGAGACCTTACACGCCAATATTCTCGAAATGATGGAGAATTGTGAAGAGTCAAGGGCCAAGGAGGAGGCAGTTAAAACTGGGTATCTAAAGACTGATGAAGAGTTCTTGAAAAAGGGTATAGGAAGCGGTGCCTGTTGTGTGACGGCCCTGATCCAAGGGGAAGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGTTCTCACTAGGGATCACAGAGCGGAACTAGAGGATGAACGGAGAAGAATTCAGGAAAAGGGAGGATATGTGGAGATCCATCGAGGAGCTTGGAGAGTTCATGGGGTACTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGAGTGGGTGGTGGCTGAACCTGATACCAAGATCTTACAATTAACTTCAGACATGGAGTTTCTTGTGTTGGCTTCTGATGGACTGTGGGAAGAGGTCGGTAACCAAGAAGCTGTTGATACTGTGACACGTTTTTGTCGAAATGAAGAGAAGCTAGGCTCACTGGGAGATGTAGAAAATGATATTGATGATGATTATGGTCAAGTAAACGTAAGTCCGTCATCGAAGCTACGAAGAGTTTCACTTGTGAAGCAGTCAAGGGGGGGCCATAAAAAGTCACTGAATGGTTGGAATGAAGTTGGTTGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATTTCATTGGTGAAGCGAGTGAGCATGAAAAAAGAGACGCCAACAAAAGAAAGCAATATGTGCAAGAAAAATGCAGCCTCTGGACTTCAAGGGGCTTGTAAGGAGCTTGTAAACCTTGCTGTGAAAAGGGGGACTTTGGATGATGTAACTGTAATAATAATTGATTTAAAACACTACAGGTCCAACATCTGA 1209 0.4467 MATCSSLLPDTHDSSSLKRKRPLNIQIPDVLREIQIPKLNDSKALKDNVSLSGIGFGVFSVKGKKSCMEDAHKIVSSLESNPKKGFFGVYDGHGGRKAAEFVVETLHANILEMMENCEESRAKEEAVKTGYLKTDEEFLKKGIGSGACCVTALIQGEEIVVSNVGDCRAVLCRGGVAEVLTRDHRAELEDERRRIQEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKEWVVAEPDTKILQLTSDMEFLVLASDGLWEEVGNQEAVDTVTRFCRNEEKLGSLGDVENDIDDDYGQVNVSPSSKLRRVSLVKQSRGGHKKSLNGWNEVGCENESPPSKSRRISLVKRVSMKKETPTKESNMCKKNAASGLQGACKELVNLAVKRGTLDDVTVIIIDLKHYRSNI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1412 402 CDD PP2Cc 54 278 IPR001932 -
Lele17g1412 402 MobiDBLite consensus disorder prediction 315 338 - -
Lele17g1412 402 ProSiteProfiles PPM-type phosphatase domain profile. 55 395 IPR001932 -
Lele17g1412 402 Gene3D - 49 401 IPR036457 -
Lele17g1412 402 SUPERFAMILY PP2C-like 48 397 IPR036457 -
Lele17g1412 402 SMART PP2C_4 41 393 IPR001932 -
Lele17g1412 402 Pfam Protein phosphatase 2C 55 275 IPR001932 -
Lele17g1412 402 PANTHER PROTEIN PHOSPHATASE 2C 43 394 IPR015655 GO:0004722|GO:0006470
Lele17g1412 402 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1412 Lele-ChrLele17 23099604 23101221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1412 15 399 PP2C-type Phosphatase Gene Family AT1G67820 53.964 3.37e-134 389