Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1396 ATGCACCGCCATTCCATAGAACCGCAGCTCGACATATTACTAAATCCGAATCCGAGCCCAGAGAGAATATATAACTCTTCAGGGCTTCATCTTCTTTACTTGCCAACAATTGCCACACCCACAATAGAATATCAGATCCGAGAATGGCATCGTCGATTTTTGGAGTTTCAGTCCCAGGATGGACAAGATGATGGCAAACGCGAATCGTTGGAATTCGTCACTGACCGCATGAATCTGACGGCTATAAGTATGTCACTTCCCAACGAAACTTTCCTCAGAGCAGCAATTTCCCTCAAGAATCAGGTGGTGCAACTTACTTGGAGAGAAGGCCTCGGCGGAGGCGACCGTACGGAACTGGTGTTGGTCCCGACGGTTTATACGGGTCTGCTCGGCACGGCTTTTACTTGCCTGAGGTCGTACGAGGTCACCGGTGACGAACGCGACTTGCTATTGTGCTCGGAGATCGTGGATGCATGTTCCACCGTTGCACGTGCCTCCCTCAGGCACGTGACGTTTTTGTGCGGTAGAGGAGGCGTTTACTCTCTTGGTGCCCTGGTGGCTAATTACATGGGCAACAATCGGAAGCGGGACCTTTTTTTGGGTTTATTAAATGAGGTAGCAACAGAGAGGGCTCTACCTGTTGGACCTGAGGAAGGCGGTTTTGGAATGTCATACGATCTTCTGTATGGGCGAGCAGGATTCATATGGGCTGCTTTATTCATAAAGAAGCATCTTGGAGAAGACGCAATGCCCAATGATATTCTGATGCCTACAATAGCTGCGATGTTGGCTGGTGGTAGGGCAGGAGCATCTGATAGCACTGACTGTCCGTTGATGTATAGATGGCATGGGACCAGGTACCTCGGTGCAGCCAATGGCCTTGCTGGTATCTTGCAGGTTCTGCTTCATTTCCCACTCAATGAAGAGGATGCCGAGGATGTCAAGGCAACTTTGAGATACCTCATGAGTAAGCGCTTCCCTCACAGTGGAAATTATCCCTCAAGTGAAGGCAATCCTAGGGATAAATTGGTGCAGTGGTCTCATGGTGCGACTGGCATTCCATCACCTTGTCCAAGGCAGCTCAGTGTCACTTATGGTTGGATAGAATTCCGGGATGCGGCGATAGAAGCAGGGGAAGTTGTGTGGAAGAGTGGACTGGTGAAGAAGTTGGGACTTGCTGATGGTGTATCTGGAAATGCATACGCCTTCCTTTCCCTCTATAAACTAACCGGAGACCCTATATATGAAGAGAGAGCAAAAGTGTTTGGTTGTTACTTGTACGATCAGGCCAAATCTTATAGACCGGACGGCCAAACCGGAGGAGGAAGCAATGCCTACTCTCTATTCCAAGGACTGGCTGGGACCGCATGCTTTTGGTTTGATCTGCTTGATCCCCACAACTCCAGAGATATTGGTTCCGGCAACTTTGGGGTGGCGAAGCTGGTGAGGGATAAACGGAGTGGTGACTTATATGCTATCAAGTTCATTGAGCGAGGCTTAAAGTCCTTTGTGAACCTTACTAGGGTTATTCATTTTGGCATTACTCATCGTGAGCAGAGCTATGTTCGGTTTTTACCTCGAAATACAATGACTATTCATGAAAAGAAAAGGAATGGAACCGTAATCTGTTCTTCGCGGAAGATGCCCCTATCCCAGTGTCCAACAGAGGCTAGGCCCCATCATTGCACAATCAAATTAGACATTGTTACCAAGTGTTCCGCCTCTTTTCTTCAGTCATCTATTCTGCACTCTCAGCCCAAATCTACTGTAGGAACCCCTGCTTATATTGCACCAGAGGTTTTGTCACGAAGGGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCCTATCCTTTTGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGCATTCTCAGCGTCCACTATTCTCTACCAGACTATGTTCGTATCTCAAAAGAGTGTAAACACCTTCTATCAAGAATATTTGTGGCCGACCCAGAGAAGGTAGACTTAAATTACAATCCAGAAATCAAAATGCACCCGTGGTTCCTGAAGAACTTGCCACTAGAATTTATGGACGAAGGGAGACAAACTGGAATGCAAGAAGATTTAGTGAACGATCCATGCGGGAGGCAGAGCATCGAAGAAATATCAAGTATAATTCAAGACGCTCGAAAAGCAGGGGATCAAGGCCCAAAAGTTGGCGGGCAGGTTGTTGGGATTGGAAGCATGGATCTTGATGAGCTGGATACTGATGCTGACAATGATGATCTAGAGGCAAGCGGCGATTTTGTCTGTGCTTTGTGA 2334 0.473 MHRHSIEPQLDILLNPNPSPERIYNSSGLHLLYLPTIATPTIEYQIREWHRRFLEFQSQDGQDDGKRESLEFVTDRMNLTAISMSLPNETFLRAAISLKNQVVQLTWREGLGGGDRTELVLVPTVYTGLLGTAFTCLRSYEVTGDERDLLLCSEIVDACSTVARASLRHVTFLCGRGGVYSLGALVANYMGNNRKRDLFLGLLNEVATERALPVGPEEGGFGMSYDLLYGRAGFIWAALFIKKHLGEDAMPNDILMPTIAAMLAGGRAGASDSTDCPLMYRWHGTRYLGAANGLAGILQVLLHFPLNEEDAEDVKATLRYLMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGIPSPCPRQLSVTYGWIEFRDAAIEAGEVVWKSGLVKKLGLADGVSGNAYAFLSLYKLTGDPIYEERAKVFGCYLYDQAKSYRPDGQTGGGSNAYSLFQGLAGTACFWFDLLDPHNSRDIGSGNFGVAKLVRDKRSGDLYAIKFIERGLKSFVNLTRVIHFGITHREQSYVRFLPRNTMTIHEKKRNGTVICSSRKMPLSQCPTEARPHHCTIKLDIVTKCSASFLQSSILHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSLPDYVRISKECKHLLSRIFVADPEKVDLNYNPEIKMHPWFLKNLPLEFMDEGRQTGMQEDLVNDPCGRQSIEEISSIIQDARKAGDQGPKVGGQVVGIGSMDLDELDTDADNDDLEASGDFVCAL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1396 777 CDD euk_LANCL 125 469 - -
Lele17g1396 777 Gene3D Transferase(Phosphotransferase) domain 1 556 699 - -
Lele17g1396 777 Gene3D Phosphorylase Kinase; domain 1 468 525 - -
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 343 363 IPR007822 GO:0031179
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 287 303 IPR007822 GO:0031179
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 122 140 IPR007822 GO:0031179
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 445 462 IPR007822 GO:0031179
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 225 240 IPR007822 GO:0031179
Lele17g1396 777 PRINTS LanC-like protein superfamily signature 390 403 IPR007822 GO:0031179
Lele17g1396 777 SMART serkin_6 465 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1396 777 PANTHER LANC-LIKE PROTEIN 77 469 - -
Lele17g1396 777 SUPERFAMILY LanC-like 115 469 - -
Lele17g1396 777 SMART LANC_like_2 119 471 IPR007822 GO:0031179
Lele17g1396 777 Pfam Lanthionine synthetase C-like protein 123 468 IPR007822 GO:0031179
Lele17g1396 777 PRINTS Eukaryotic LanC-like protein family signature 361 382 IPR020464 -
Lele17g1396 777 PRINTS Eukaryotic LanC-like protein family signature 276 288 IPR020464 -
Lele17g1396 777 PRINTS Eukaryotic LanC-like protein family signature 323 338 IPR020464 -
Lele17g1396 777 PRINTS Eukaryotic LanC-like protein family signature 406 424 IPR020464 -
Lele17g1396 777 SUPERFAMILY Protein kinase-like (PK-like) 470 677 IPR011009 -
Lele17g1396 777 ProSiteProfiles Protein kinase domain profile. 386 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1396 777 ProSitePatterns Protein kinases ATP-binding region signature. 471 494 IPR017441 GO:0005524
Lele17g1396 777 Gene3D - 43 467 IPR012341 GO:0005975
Lele17g1396 777 Pfam Protein kinase domain 584 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1396 Lele-ChrLele17 23014821 23022889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1396 577 703 CBL-interacting serine-threonine protein kinases AT5G25110 42.748 1.25e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele17g1396 LANC_like 1.8e-72 CL0059