Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1391 ATGGCCATTACATCTTTTGGAAGCACATCTGTTCCACAATGGGGAATCCGTCCTCAGTTATTTATGAGGTCCTATATGACAGGCAGGATTACGTCATCTGGCTTCAGTGGTATAAGTAGGGTAAGCTTTATGGCTGGCCCAAGTTCAAGCTTTTTTGGTCGTGATTCCTTGCATGCGCTCTATGAACTGGGTTCTTCTCAAACTTTTCATCGTCGTAGGGGATCAAGGTTAATAGTTAGAGCAGATGTGGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGACTGCTTATCGGAAACTTGCCCGGAATTATCACCCAGATGTGAACAAAGAACCTGGCGCAGAACAGAAATTTAAGGAAATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCCATATATGACAGATATGGAGAGGCTGGGCTTAAAGGTTCTGGAATAGGCATGGGGGATTTCAGCAATCCTTTTGATCTGTTTGAGACTCTGTTTGAGGGTATGAATCGTGGATCCAGAGGTTCCTGGAATGGAGCTCTTGATGGTGAAGATGAGTACTATAGTCTTGTCTTGAACTTTAAGGAAGCAGTTTTTGGAGTAGAAAAAGAGATAGAGATCAGTCGGCTAGAGAGCTGTGGAACTTGCAATGCTGGCGTAGACTCTGCTAGTCGTTTGAGGGTCCGAAATGAAGGAAATGCTGGAAGGCGAGGTGGTGCTCCTGGAGACCTCTTTGTTGTTATTGAAGTTATGCCCGACCCAGTACTTAAACGCGATGACACCAACATTTTATACACTTGCAAGGTGTCATACACAGATGCAATCTTGGGAACTACTGTCAAGGTTCCTACTGTAGATGGCATGGTGGATCTAAAAATCCCTGCTGGGACCCAACCGAACACAACACTTGTTATGGCTAGAAAAGGTGTTCCCCTGCTGAACAAGAGCAGTATGAGGGGTGATCAGTTGGTTCGGGTGCAAGTTGAAATCCCCAAAAAGTTGAGCAGCGATGAGAGGAAGCTTATTGAGGAACTTGCTGATTTAAGCAAGGGCAAGACTGCGACGGGTAAGAGATAA 1098 0.4435 MAITSFGSTSVPQWGIRPQLFMRSYMTGRITSSGFSGISRVSFMAGPSSSFFGRDSLHALYELGSSQTFHRRRGSRLIVRADVDYYSVLGVSRNASKSEIKTAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGIGMGDFSNPFDLFETLFEGMNRGSRGSWNGALDGEDEYYSLVLNFKEAVFGVEKEIEISRLESCGTCNAGVDSASRLRVRNEGNAGRRGGAPGDLFVVIEVMPDPVLKRDDTNILYTCKVSYTDAILGTTVKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLNKSSMRGDQLVRVQVEIPKKLSSDERKLIEELADLSKGKTATGKR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1391 365 Gene3D - 258 364 - -
Lele17g1391 365 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 52 224 - -
Lele17g1391 365 Gene3D DnaJ domain 81 185 IPR036869 -
Lele17g1391 365 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Lele17g1391 365 CDD DnaJ 84 137 IPR001623 -
Lele17g1391 365 Gene3D - 189 255 - -
Lele17g1391 365 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Lele17g1391 365 SUPERFAMILY Chaperone J-domain 80 177 IPR036869 -
Lele17g1391 365 CDD DnaJ_C 191 341 - -
Lele17g1391 365 FunFam Putative Mitochondrial DnaJ chaperone 190 253 - -
Lele17g1391 365 Pfam DnaJ domain 84 145 IPR001623 -
Lele17g1391 365 PRINTS DnaJ domain signature 120 140 IPR001623 -
Lele17g1391 365 PRINTS DnaJ domain signature 140 159 IPR001623 -
Lele17g1391 365 PRINTS DnaJ domain signature 86 104 IPR001623 -
Lele17g1391 365 PRINTS DnaJ domain signature 104 119 IPR001623 -
Lele17g1391 365 SMART dnaj_3 83 140 IPR001623 -
Lele17g1391 365 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 271 IPR008971 GO:0006457|GO:0051082
Lele17g1391 365 SUPERFAMILY HSP40/DnaJ peptide-binding domain 263 349 IPR008971 GO:0006457|GO:0051082
Lele17g1391 365 FunFam Chaperone protein dnaJ 1, mitochondrial 258 365 - -
Lele17g1391 365 FunFam Chaperone protein dnaJ A6 chloroplastic 81 184 - -
Lele17g1391 365 Pfam DnaJ C terminal domain 195 338 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1391 Lele-ChrLele17 22987787 22990921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1391 85 147 C2H2 Transcription Factor Family AT1G74250 42.029 4.78e-09 56.2