Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1374 ATGCTAATTGCCAGGCATCGTATACGGAGCGCCTTTATTAGGTTCTGGAGCCCTGCTGAATTAGCTTCGCTGTCTCCTTCTGACCCTTTGAATTTCGTCATCCTCGACAGACTTACAACACGCAAGAATGACGAAGATCCGAAATACAAAGTAGAAAGCAAGGAGAGAAGGCCAGTGATCATGACGCAGCAGAATGTGATGGTTTCCGATGCTTATCCTGGACTCAACATGGCTATTACCGTCTCCGTTTCAAACTCCTCCATTTTCACTGCCACCACACACAAACCACCGTCCGTCCCCTCCGGCTTTATTTCCATTCCCCGGAGAAAGGTGCTCAAGAACCTTGAAATTAATGCCTGCGTTGACTCCATGAGAGCCTCTTCTCCCACCCACGCCAAATCCACTCCTTCTCTCGCCGAAGAACACAGCTCTTGGATTCTTCACCACCCCTCTGCATTAGACATGTTCGAGCAAATCATCGATGCCTCAAAAGGCAAGCAGATCGTTATGTTTCTGGATTACGACGGCACGCTCTCACCTATCGTTAACGACCCTGACCGTGCTTTCATGTCCGGCGAAATGAGAAAAACTGTGAGAAAACTCGCGAGGTGTTTTCCCACTGCCATAGTAAGCGGCAGATGCAGAGACAAGGTATACAGCTTTGTTCGCCTGGCAGAGCTATATTATGCGGGAAGCCATGGCATGGATATCAAAGGCCCAACAAGATGCTCCAAATACAATAAAGGAAGCAAAGCAGAGGCAATTCTTTTTCAGCCTGCCAGTGAGTTTCTTCCCATGATAGATGAGGTGTACCGAGCGTTAGTTGAGAAAACCAAATCAACACCGGGAGCGATGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCACTATCGTTGTGTTGATGAGAAGAAATGGAGTGAACTGGCTCACCAAGTGAAATCGGTGCTTAAGGAGTACCCGAAGCTTCGTCTCAGCCAAGGAAGGAAGGTGTTTGAGATTCGTCCCACTATTAAGTGGGACAAAGGGAAGGCCCTGGAATTTCTGCTAGAGTCACTTGGATTTGCCAATTGCGATGATGTCTTCCCTGTCTACATTGGTGATGATCGAACCGACGAAGATGCCTTTAAGAAATTGAGAGACAGAGGACAAGGTTTGGGTATTCTTGTGTCAAAATTTCCAAAGGACACTAGTGCATCTTACTCATTGCAGGAACCCGAGGAGGCAAGTACAAGTGTACCACCGACCCTTTGTTGCTATTTATGTGAAGGAGTTTCTTCAACGCTTGGTGGAGTGGAAACAAGCATCGCAGCGTACATACTCCAAAGTCTAAATGTGTACTCTATCTAG 1347 0.4729 MLIARHRIRSAFIRFWSPAELASLSPSDPLNFVILDRLTTRKNDEDPKYKVESKERRPVIMTQQNVMVSDAYPGLNMAITVSVSNSSIFTATTHKPPSVPSGFISIPRRKVLKNLEINACVDSMRASSPTHAKSTPSLAEEHSSWILHHPSALDMFEQIIDASKGKQIVMFLDYDGTLSPIVNDPDRAFMSGEMRKTVRKLARCFPTAIVSGRCRDKVYSFVRLAELYYAGSHGMDIKGPTRCSKYNKGSKAEAILFQPASEFLPMIDEVYRALVEKTKSTPGAMVENNKFCVSVHYRCVDEKKWSELAHQVKSVLKEYPKLRLSQGRKVFEIRPTIKWDKGKALEFLLESLGFANCDDVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPKDTSASYSLQEPEEASTSVPPTLCCYLCEGVSSTLGGVETSIAAYILQSLNVYSI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1374 448 SUPERFAMILY HAD-like 169 407 IPR036412 -
Lele17g1374 448 FunFam Trehalose 6-phosphate phosphatase 260 336 - -
Lele17g1374 448 FunFam Trehalose 6-phosphate phosphatase 168 255 - -
Lele17g1374 448 FunFam Trehalose 6-phosphate phosphatase 266 413 - -
Lele17g1374 448 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 170 381 IPR006379 -
Lele17g1374 448 Pfam Trehalose-phosphatase 171 405 IPR003337 GO:0003824|GO:0005992
Lele17g1374 448 TIGRFAM T6PP: trehalose-phosphatase 166 407 IPR003337 GO:0003824|GO:0005992
Lele17g1374 448 CDD HAD_TPP 169 407 - -
Lele17g1374 448 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 90 409 IPR044651 GO:0004805|GO:0005992
Lele17g1374 448 Gene3D - 250 336 - -
Lele17g1374 448 Gene3D - 170 402 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1374 Lele-ChrLele17 22873850 22878540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1374 157 378 Trehalose Biosynthesis Gene Families AT1G60140 28.390 9.04e-09 55.8