Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1373 ATGGCAGCAACTATAGGTTTGTATAATAATAGCGGCCGCCTGGCATCAGATTTCTTAGATCCGTGTAGTGAAGATCTGATAAAGGCGCTCGAACCTTTTATGAAAATGGATTCGTCGACGCCTTCTCTGTCTTCTATCTCTCTTCCATCTTCACCTTCCTGCTCTTATACTCCACCCACTTCTATTTCCGGTTATTATCCCAACCTCCGAACAGCACCGAACTCCCACATATTTTCTCCGGGGTTCTCGAGTGGCATAGGGCTTAACCAATTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCAGGCCCGACAGCAACAATCCCTCGACCTCCTCCGCCCTAAACATGTCCCCATGAAACATGTCCGTAATGCTCCGAATTCCACGAAACTATACCGAGGAGTGAGGCAAAGGCATTGGGGGAAATGGGTGGCTGAGATCAGACTCCCAAAGAACCGAACCCGTCTCTGGCTCGGCACTTTTGACACAGCCGAAGAGGCTGCCTTGGCTTATGACAACGCTGCCTATAAGCTCAGGGGTGACTTCGCTCGCCTTAATTTCCCTCATCTGCGTCACCAAGGAGCTCACGTCTTTGGCGAATTTGGGGATTACAAACCTCTTCATTCCTCCGTCGATGCCAAGCTTCAAGCTATTTGTGAAAGTTTGGCCAATTCCCAGAAACAGAGGGCAGGGGATTCTTGCTCCGTCCGCGAGTCAAAGCCTAAGGTGGCGTCGGACGAGTCAGAATCGAAAAGTGATGTGGAGGATTGTAAGTTGGAGAACACAGCATCGTCGCCCTTGTCTGACGAATCCTGGGCCGGCTCGTCTTCCCCCGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAAGGACGAAACCATCGACTTCGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 945 0.5016 MAATIGLYNNSGRLASDFLDPCSEDLIKALEPFMKMDSSTPSLSSISLPSSPSCSYTPPTSISGYYPNLRTAPNSHIFSPGFSSGIGLNQFTPSQILQIQAQFQARQQQSLDLLRPKHVPMKHVRNAPNSTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGDFARLNFPHLRHQGAHVFGEFGDYKPLHSSVDAKLQAICESLANSQKQRAGDSCSVRESKPKVASDESESKSDVEDCKLENTASSPLSDESWAGSSSPESDITFLDFSDSKDETIDFGLEKFPSVEIDWSAI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1373 314 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 16 314 - -
Lele17g1373 314 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Lele17g1373 314 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Lele17g1373 314 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Lele17g1373 314 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Lele17g1373 314 MobiDBLite consensus disorder prediction 261 286 - -
Lele17g1373 314 MobiDBLite consensus disorder prediction 232 286 - -
Lele17g1373 314 MobiDBLite consensus disorder prediction 235 260 - -
Lele17g1373 314 Gene3D AP2/ERF domain 133 191 IPR036955 GO:0003700|GO:0006355
Lele17g1373 314 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
Lele17g1373 314 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Lele17g1373 314 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Lele17g1373 314 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1373 Lele-ChrLele17 22862426 22863370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1373 3 314 AP2-EREBP Transcription Factor Family AT4G39780 50.000 7.23e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele17g1373 AP2 7.6e-15 CL0081