Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1357 ATGAAAGCTCTCTCTGATTTCTTCTTTCATCTCTACGCAAAGACCATCGTCTTGTTGGTCTTCCTGCTGATAGAACTCATCATCCTCATTCGAAACCTAAAAATACACACCCCTCCAATTACCATCTCCCAGTACCTCCAACTCATCGAAGCTAATAACCCCACCGTTTGTTTTACCGGAACTCTGAACATGGCCGACCAACTAGAGTGCAGCGTTTGCTTATCTGAGCTTCAAGAAGGCGACAAAGTTAGGGACTTGAAGTGTAAACACACATTTCACAAAGAATGCTTGGACCGGTGGTTGCTTCAGTTTTGGGCCACTTGTCCTCTCTGTAGGAACAGAGTCCTACCAGAAGATGTCGTTACCAATTATCGGCGGCTACGGAATCAGAGGGAATTGATCATCTTTTCCTTCTGGGATTCCTTGGAAGATTATGAATGGTCTGGATCTCTGGAAATTCTGGAAATATTGAAGTCTCTATCGGTCCAGTTCACGTTGAAAATATCTCAGCAGAAGGAGATATTTGTAGACATACTACTCCGCAGAGTTATGGGCAAACATCACATTTCCAAAACTGCCAAATGCAAATCCATGTTGGTTTTCCAGCAAACTATTGGCAGGAAAAAATATCTGGTCAAGGGTCAAGCACAGGGCAGTGTCGTTTTGGCCAATGGCACACTATTGGATGAGGAGAGGTAG 699 0.4406 MKALSDFFFHLYAKTIVLLVFLLIELIILIRNLKIHTPPITISQYLQLIEANNPTVCFTGTLNMADQLECSVCLSELQEGDKVRDLKCKHTFHKECLDRWLLQFWATCPLCRNRVLPEDVVTNYRRLRNQRELIIFSFWDSLEDYEWSGSLEILEILKSLSVQFTLKISQQKEIFVDILLRRVMGKHHISKTAKCKSMLVFQQTIGRKKYLVKGQAQGSVVLANGTLLDEER 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1357 232 SMART ring_2 70 111 IPR001841 -
Lele17g1357 232 CDD mRING-H2-C3H2C2D_ZSWM2 69 112 - -
Lele17g1357 232 PANTHER - 1 131 - -
Lele17g1357 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 127 IPR013083 -
Lele17g1357 232 SUPERFAMILY RING/U-box 60 118 - -
Lele17g1357 232 Pfam Ring finger domain 69 112 IPR001841 -
Lele17g1357 232 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1357 Lele-ChrLele17 22782517 22784352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1357 69 138 C3H Transcription Factor Family AT1G15100 47.143 7.98e-18 75.9