Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1349 ATGAATTCCGTACCCAACTTCTCTGTTGCGGTTTTCTCCCTTTGTTTCCTTTCTCTGCTCTTCTCGGGGTTTGCTTCTGAAGCTGAACTCCGATCTTTGCTTGAATTCAAGAAAGGGATTGAAAGAGATCCGATTAGAAGAGTTTTCGACTCATGGAAGCTGTCTTCACTCAGCGACCTCAACGACTGTCCCCATTCTTGGGCTGGAGTTGCCTGCGAAGAGGGAACCGGCAACGTCACCGCCGTAGTCCTTGACAGGCTCAGTTTGGGAGGTGAACTGAAATTTCACACTCTACTTGAACTCAAGATGCTAAGGAATCTCAGCCTCTCCGGGAATGACTTTACTGGGCGGCTGCCGCCGGCATTGGGGACATTGGCCACTCTGCAGCATTTGGATCTTTCCGACAACAAGTTCTACGGGCCGATCCCTGCTCGAATTAATGACCTTTGGGGATTAAATTACCTCAATTTGTCTAAGAATAACTTCAAGGGTGGGTTTCCGGGAGGGATATATAATCTTCAGCAGCTGAGAGTGCTGGATTTGCGTTCGAATGAGCTTTGGGGTGATATTGGTGATGTATTGTCCGCATTGCGAAATGTCGAGCATCTTGATTTGAGCTCTAATAAGTTCTACGGGGGGCTCTCGCTTGGAGCGGAGAATGTTTCTGGCTTGGCAAATACGGTCCATTTTCTAAATTTGAGTTTCAACGAACTAAATGGCCCCTTCTTTGAGGGAGATTCAATTGCATTGTTTCGTAATTTACAAGTTTTGGATTTGGGTCACAATCAGATCAGGGGGCAGCTTCCCTCTTTTGGGTCACTGCCGAGCCTTCGAGTTTTGCGACTTGACAGTAATCTATTATTTGGGTCAATACCGGAAGAGTTGTTTGAAACTTCTATGTCATTAGAAGAATTGGATCTTAGCGGCAACGGGTTTACGGGTTCAGTTCCTTCAATCAACTTGACGTCTTTGAATATATTGAATATTTCATCCAATGGTTTATCAGGCTCTTTGCCAACATCTTTGAGAAAATGCACTGTGATGGACTTAAGCAGGAATATGTTAGATGGTGATTTATCTGTTATGCAGAACTGGGACGCCACATTTGAGGTTCTTGATCTGAGTTCAAACAGGCTGTCAGGAAGCTTTCCCAATTTGACAAATCAGTTTCAGGGATTAGCCACACTTGCTCTCAGGAATAATTCCTTAGTTGGATCTTTGCCTCCTAATTTGGGGACCTATTCTAAATTGTCCATGGTTGATTTCAGTTTGAATGAACTTAGTGGCCCTATTCCTGTTAGTTTATTTACTTCAACAACATTGACAAGCCTTAATCTTTCTGGAAATCATTTTACCGGGTCAATTCCTCTTGGAAGCTCAGGAGCCAGTGAATTAATAATTATGACACCTTATCAGCCAATGGAATATCTTGATTTATCTAATAACTCCTTAAAGGGTATCTTACCTTCTGACATAAGTAGGATGGGTGGCCTCAAACTGTTGAATCTTGCTGGGAATGATTTTTCCGGACAGCTGCCCAATGAATTGAGCAAACTTATTAATCTGGAGTACCTTGATTTGTCTAACAATAGATTTAAGGGACAAATTCCTGATAAGCTTTCATCCAGCTTGAATGTGTTTAATGTGTCTAATAATGATTTATCTGGCGATGTTCCAGTTAATTTGAGGAGGTTTCCTCCTTCATCATTTCACCCTGGAAATCAAAAGCTGAACGTCCCATATTATACTAATGGTAATGGCGCTTCAGTGCCTGATAATATTTATGGTCATGGGAAACGTCATAGTTCAAAGGGAAATATCAAGATAGCCATTATTCTGGCTTCAGTTGGTGCTGCTGTGATGATTGTTTTTGTTTTCTTGGTTTATCATAGAACACAACTTAAAGAATTCCGTGGCCGGAGTGGGTTTGCTGGTCAAAATACTGGAAGGGATGTCAAATCAGGAGGACTTGCGCGGCCTTCCCTCTTCAAGTTCCACCCCGCTCAGCCACCAGCAAGTTCATTGAGCTTTTCAAATGATCACTTGCTGACATCTAATTCAAGATCACTCTCTGGACAGTCAGAGTTTATAACTGAAATTACTGAGCATGGCTTGGCTCAGGGAACAGGAGCAGCTAGTTCAGCTTCTGTAAATCCAGATTTGATGGATAACCCCCCCACATCATCTGGAAGGAAGTCATCTCCGGGTTCCCCATTATCTTCGTCCCCCCGTTTTATAGAAGCACATGAAAAACCAGTTACGTTGGATGTGTATTCACCAGATCGCCTGGCTGGAGAGTTGTACTTCCTTGATTCTTCCCTGGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCGGAAGTTCTTGGCAGAAGTAGCCATGGTACTTTATACAAAGCTACACTAGACAGTGGTCATATGTTGACTGTAAAGTGGTTACGTGTTGGATTGGTCAAACATAAGAAGGAATTTGCGAGAGAAGTTAAAAGGATTGGTTCCATGAGGCATCCTAACATTGTCTCATTGCGGGCATACTATTGGGGGCCCAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACCTGGCGACAGCTTGGCTTTACATCTTTATGAGACGACACCCCGGAGGTACTCACCATTATCATTCAGCCAGAGAGTAAGAGTTGCTGTTGAAGTTGCTCGATGTCTTTTATACCTTCATGATCGAGGGCTTCCACATGGAAATCTAAAACCAACAAATATATTATTAGCAGGCCCTGAATACTGCGCACGTCTAAGTGACTATGGTCTGCACCGCCTCATGACGCCTGCTGGAATATCAGAGCAGATACTGAATCTCGGAGCACTCGGATACCGAGCTCCAGAACTTGCGTCTGCTAATAAACCAGTCCCATCATTCAAGGCAGACGTGTATGCACTTGGTGTGATCTTAATGGAATTATTAACGAGAAAAAGTGCAGGTGACATAATATCAGGGCAATCCGGGGCTGTGGATCTAACAGATTGGGTTAGGCTCTGTGAGCAAGAAGGACGTGTAATGGACTGTATCGACAGAGACATTGCAGGCGGTGAAGAATCTTCCAGAGAGATGGACGACTTGCTTGCAATATCACTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAATATCAGACAAGTTTTTGACGATCTTTGTTCTATATCAGCTTGA 3192 0.4364 MNSVPNFSVAVFSLCFLSLLFSGFASEAELRSLLEFKKGIERDPIRRVFDSWKLSSLSDLNDCPHSWAGVACEEGTGNVTAVVLDRLSLGGELKFHTLLELKMLRNLSLSGNDFTGRLPPALGTLATLQHLDLSDNKFYGPIPARINDLWGLNYLNLSKNNFKGGFPGGIYNLQQLRVLDLRSNELWGDIGDVLSALRNVEHLDLSSNKFYGGLSLGAENVSGLANTVHFLNLSFNELNGPFFEGDSIALFRNLQVLDLGHNQIRGQLPSFGSLPSLRVLRLDSNLLFGSIPEELFETSMSLEELDLSGNGFTGSVPSINLTSLNILNISSNGLSGSLPTSLRKCTVMDLSRNMLDGDLSVMQNWDATFEVLDLSSNRLSGSFPNLTNQFQGLATLALRNNSLVGSLPPNLGTYSKLSMVDFSLNELSGPIPVSLFTSTTLTSLNLSGNHFTGSIPLGSSGASELIIMTPYQPMEYLDLSNNSLKGILPSDISRMGGLKLLNLAGNDFSGQLPNELSKLINLEYLDLSNNRFKGQIPDKLSSSLNVFNVSNNDLSGDVPVNLRRFPPSSFHPGNQKLNVPYYTNGNGASVPDNIYGHGKRHSSKGNIKIAIILASVGAAVMIVFVFLVYHRTQLKEFRGRSGFAGQNTGRDVKSGGLARPSLFKFHPAQPPASSLSFSNDHLLTSNSRSLSGQSEFITEITEHGLAQGTGAASSASVNPDLMDNPPTSSGRKSSPGSPLSSSPRFIEAHEKPVTLDVYSPDRLAGELYFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVSLRAYYWGPREQERLLLADYIPGDSLALHLYETTPRRYSPLSFSQRVRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPEYCARLSDYGLHRLMTPAGISEQILNLGALGYRAPELASANKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSREMDDLLAISLRCILPVNERPNIRQVFDDLCSISA 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1349 1063 Gene3D Phosphorylase Kinase; domain 1 765 860 - -
Lele17g1349 1063 SUPERFAMILY Protein kinase-like (PK-like) 786 1058 IPR011009 -
Lele17g1349 1063 PANTHER OS07G0626500 PROTEIN 9 1061 - -
Lele17g1349 1063 PRINTS Leucine-rich repeat signature 474 487 - -
Lele17g1349 1063 PRINTS Leucine-rich repeat signature 519 532 - -
Lele17g1349 1063 Pfam Leucine Rich repeats (2 copies) 253 292 IPR025875 -
Lele17g1349 1063 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Lele17g1349 1063 FunFam Nuclear pore complex protein NUP107 26 192 - -
Lele17g1349 1063 FunFam Pollen receptor-like kinase 1 861 1063 - -
Lele17g1349 1063 Pfam Leucine Rich repeat 299 314 IPR001611 GO:0005515
Lele17g1349 1063 Pfam Leucine Rich repeat 438 453 IPR001611 GO:0005515
Lele17g1349 1063 SMART LRR_typ_2 519 543 IPR003591 -
Lele17g1349 1063 SMART LRR_typ_2 251 273 IPR003591 -
Lele17g1349 1063 SMART LRR_typ_2 101 125 IPR003591 -
Lele17g1349 1063 SMART LRR_typ_2 321 344 IPR003591 -
Lele17g1349 1063 SMART LRR_typ_2 274 298 IPR003591 -
Lele17g1349 1063 SMART LRR_typ_2 173 197 IPR003591 -
Lele17g1349 1063 ProSiteProfiles Protein kinase domain profile. 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1349 1063 Pfam Protein kinase domain 787 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1349 1063 Gene3D Transferase(Phosphotransferase) domain 1 862 1063 - -
Lele17g1349 1063 SUPERFAMILY RNI-like 106 554 - -
Lele17g1349 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 466 - -
Lele17g1349 1063 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Lele17g1349 1063 ProSiteProfiles Leucine-rich repeat profile. 521 543 IPR001611 GO:0005515
Lele17g1349 1063 MobiDBLite consensus disorder prediction 708 741 - -
Lele17g1349 1063 Gene3D Ribonuclease Inhibitor 220 586 IPR032675 -
Lele17g1349 1063 MobiDBLite consensus disorder prediction 708 745 - -
Lele17g1349 1063 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Lele17g1349 1063 Gene3D Ribonuclease Inhibitor 25 215 IPR032675 -
Lele17g1349 1063 FunFam Leucine-rich repeat receptor protein kinase EMS1 467 562 - -
Lele17g1349 1063 FunFam Leucine-rich repeat receptor-like protein kinase 768 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1349 Lele-ChrLele17 22740837 22745205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1349 441 562 Receptor kinase-like Gene Family AT3G56370 34.921 1.22e-08 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele17g1349 Pkinase 3.6e-29 CL0016