Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1337 ATGGACTACTATTTTGGAAACCCTAATCACTCACAATTCTCTGCAGCAAATCCATCGTCGTCTGATCAGTTCATTTCGGATTATTTGGTGCTTGATAATGGTGTTGGGCATCAAGAATCCTGGTCACACAATACAGAATCATCGGAGAAGGCAACTAGCGATGCCAGTGGATTTAGTGCCGCTACTGATGCTACCTCGTCTCAGAATAATAACATGCAAGTGCTTTCATTTCTCTCTTCTTTCTCAAAATGCAAAAACGAGATCAAACGAAACAAGCTGGGAGAGATGAGCCGAAGGATCGCGTTCAGAACCAGATCGGAGCTCGAGGTTATGGATGATGGGTATAAATGGAGGAAGTACGGAAAGAAGTCGGTGAAGAACAGTCCGAATCCAAGGAACTACTACAAGTGTTCGTATGGAGGATGCAGTGTGAAGAAGAGGGTGGAAAGGGACAGGGATGACTCGAGCTACGTGATAACAAGTTATGAGGGAGTTCACAACCACGAGATCCCAACTGCTACCTACTCCTCCTTCATCCATCCTAATCCTTGGCCCTTTCACTCTTCTGCAAATTCCTCATCTTCCTAG 588 0.4524 MDYYFGNPNHSQFSAANPSSSDQFISDYLVLDNGVGHQESWSHNTESSEKATSDASGFSAATDATSSQNNNMQVLSFLSSFSKCKNEIKRNKLGEMSRRIAFRTRSELEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVERDRDDSSYVITSYEGVHNHEIPTATYSSFIHPNPWPFHSSANSSSS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1337 195 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1337 195 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1337 195 SUPERFAMILY WRKY DNA-binding domain 103 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1337 195 FunFam WRKY transcription factor 57 97 171 - -
Lele17g1337 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 187 IPR044810 GO:0003700
Lele17g1337 195 Gene3D WRKY domain 96 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1337 195 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1337 195 MobiDBLite consensus disorder prediction 39 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1337 Lele-ChrLele17 22683865 22685286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1337 8 188 WRKY Transcription Factor Family AT5G64810 44.898 4.91e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele17g1337 WRKY 5.3e-23 CL0274