Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1334 ATGGTGTGTGTTGACGTAGACATGGCTCGCAGAACCTCCTATGCGTTTAACCAATATTTTCAAGTGAGAGACCAAAGCGGGGATGCTTGTGATTTCAGTGGAATAGGGCAAATTGTGAGCGACGATCCATCCTCTGGGAATTGCTTCTTCGCTGTAGAAATACAGAGTAGTGGCCACATGCTTAAAGCAGGGCATGTGATGACAGCACTGTTGATTGACGCTTTCTTCCTCATTTGTTGGACCTTGATGGGTCCCTTTACACTGCCCATTATTGCTGAAGCCTCTTCCATATCATCTCCAGATGCTGGTACCAAGAGGACACAGAACTTATCGCTGAGAAAATCTTTTGCATCGGTTAGCATGGGAGAGGAAAATCCTTTTGATTTTTTACGCACCTTATTTGAGGGCTTAGTTGCTGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCTATTGACACTAGAAAGACACGCTTGCAGGCTACCCGGGGAGGAGAAAAATTAGTTTTCAAAGGCCTTTATTCTGGATTGGCAGGAAATCTTGCCGGTGTCTTACCGGCATCTGCTCTTTTTGTTGGAGTCTATGAACCTGTAAAGCAGACACTGACGAGGATATTTCCAGAAAATTTGAGTGCTCTTGCTCATTTTACCGCAGGTGCCATAGGGGGAATTGCAGCTTCACTGATTCGTGTTCCAACAGAGGTTGTTAAACAACGAATCCAAACTGGGCAATTCACTTCACCTGTTATTGCTGTCCGCTATATTTCTTCTGTTGAGGGCATCAAAGGACTTTATGCAGGATATGGGTCTTTTCTACTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGCTTCGAATAGGTTATATGTTGGCGGCACGAAGAAATCTGAATGACCCGGAAAATGCCATCGTCGGTGCTTTCGCTGGTGCACTGACTGGCGCTATAACTACTCCCCTTGATGTGATTAAGACGAGATTAATGGTTCAGGGAACTGCAAACCGATACAAAGGAATCGTGGATTGTGTTCAAACTGTCATCAAGGAAGAGGGGCCTCAGGCTTTTCTGAAGGGCATTGGGCCAAGGGTGCTTTGGATAGGGATAGGTGGCTCAATCTTCTTCGGCGTCTTGGAGGGCACAAAGCGTATTCTGGCCGAGAGGCGTCCTAATCCTCCTCACACCTCTGACTCAAAGCTTCAGTGA 1221 0.4619 MVCVDVDMARRTSYAFNQYFQVRDQSGDACDFSGIGQIVSDDPSSGNCFFAVEIQSSGHMLKAGHVMTALLIDAFFLICWTLMGPFTLPIIAEASSISSPDAGTKRTQNLSLRKSFASVSMGEENPFDFLRTLFEGLVAGGTAGVVVETALYPIDTRKTRLQATRGGEKLVFKGLYSGLAGNLAGVLPASALFVGVYEPVKQTLTRIFPENLSALAHFTAGAIGGIAASLIRVPTEVVKQRIQTGQFTSPVIAVRYISSVEGIKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYMLAARRNLNDPENAIVGAFAGALTGAITTPLDVIKTRLMVQGTANRYKGIVDCVQTVIKEEGPQAFLKGIGPRVLWIGIGGSIFFGVLEGTKRILAERRPNPPHTSDSKLQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1334 406 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 106 396 - -
Lele17g1334 406 Gene3D Mitochondrial carrier domain 135 400 IPR023395 -
Lele17g1334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 303 389 IPR018108 -
Lele17g1334 406 Pfam X8 domain 7 36 IPR012946 -
Lele17g1334 406 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 135 402 - -
Lele17g1334 406 PRINTS Mitochondrial carrier protein signature 136 149 IPR002067 GO:0055085
Lele17g1334 406 PRINTS Mitochondrial carrier protein signature 149 163 IPR002067 GO:0055085
Lele17g1334 406 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Lele17g1334 406 PRINTS Mitochondrial carrier protein signature 312 334 IPR002067 GO:0055085
Lele17g1334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 203 IPR018108 -
Lele17g1334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 294 IPR018108 -
Lele17g1334 406 SUPERFAMILY Mitochondrial carrier 134 384 IPR023395 -
Lele17g1334 406 Pfam Mitochondrial carrier protein 307 392 IPR018108 -
Lele17g1334 406 Pfam Mitochondrial carrier protein 212 293 IPR018108 -
Lele17g1334 406 Pfam Mitochondrial carrier protein 133 205 IPR018108 -
Lele17g1334 406 SMART X8_cls 1 50 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1334 Lele-ChrLele17 22663088 22670004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1334 220 396 Chloroplast and Mitochondria Gene Families AT1G07030 33.333 7.87e-16 76.3