Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1333 ATGTCAACAACCACACGATCAATTCTGAACCATAGTGGTAATTTGTTCGACGATCAGCAGTACGTGATGCATACACAGCTGGGTTTCCTTCCTAATTTCCCAGCAAATCTGAGCTTTCCTTCTTTGGGTTGCCATCAATCTTTGAAGGGCTTCCATACAATGGGTCCTTCGCTTTCATCCGAAACATCTTCTACCACCACTGCAAATCTTACAGAAACCCTATTTGCAGCCAATGCTCAAAAGCCAAGGCAAGACCTAGCTTTTAGCTTGGGAGGACCAACCCATCTCCTTTCCTTGAACACATCGAGTGTACTAAATCCATGGGGATGGGGAGAAGTAAGCGAATGCCTGAGCAGTAAAAGTAGTGGAGGAGAGAATAGCCATTGTCTAGGGATGTCCGCAATGAAGATGAAGAAGATAAAGGGAAGGAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCAATGTCGATGTCTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAGGTCGTCAAGAACACCCAGCACCCCAGAAGCTACTATCGTTGCACACAAGACAATTGCCGCGTGAAGAAGAGGGTGGAGCGCCTGGCGGAGGATCCGAGGATGGTGATAACAACGTACGAAGGGAGACACGCACACTCTCCCTCCAATGATGTTGAAGACTCGCAAGCTCCTTCTCGGCTTACTAATTTCTTCTGGTAG 720 0.4792 MSTTTRSILNHSGNLFDDQQYVMHTQLGFLPNFPANLSFPSLGCHQSLKGFHTMGPSLSSETSSTTTANLTETLFAANAQKPRQDLAFSLGGPTHLLSLNTSSVLNPWGWGEVSECLSSKSSGGENSHCLGMSAMKMKKIKGRRKVREPRFCFKTMSNVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDVEDSQAPSRLTNFFW 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1333 239 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1333 239 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1333 239 Gene3D WRKY domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1333 239 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 222 IPR044810 GO:0003700
Lele17g1333 239 FunFam WRKY transcription factor 57 148 222 - -
Lele17g1333 239 SUPERFAMILY WRKY DNA-binding domain 154 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1333 239 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1333 Lele-ChrLele17 22655090 22656604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1333 45 239 WRKY Transcription Factor Family AT4G39410 47.200 1.45e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele17g1333 WRKY 6.5e-25 CL0274