Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1327 ATGCCGATGATATTTCCAGATATCGATAGGGAGAAGGAGATGGCGGCCATGGTTTCAGCTTTGACCCACGTCTTGTCTGGCGAGGTGCCCTCTGATTATACGGATTTTCATCAATACTCAACGTACCTTAATACAGTTGAAGCTTCTGCAACGCCATCTTGTTCATTCTATGGTGCTAGTTCTGCGGCAACGATAAGTATGGAAGATGGCACATTCTCACAGAGAGGTTCATCCTCATCCCCTGCTGTTACAAATAGAGAAGGGAGGAACGGAAGAAACGAAACGAGGAATGCAGTATATGAATACAGAGCACAGAACAGGAGGGAGCAGGGGAGAAGAAAATACAGAGGAGTGAGACAGAGGCCGTGGGGGAAGTGGGCCGCAGAAATCAGAGATCCATTCAAAGCAGCGAGGGTGTGGTTAGGCACATTTGAAACAGCAGAAGCCGCCGCCAGGGCATACGACGAAGCTGCCCTGCGTTTCAGAGGCAACAGGGCAAAGCTCAATTTCCCTGAAAATGTCACCCTACGTCCCCCAACCCCGAATCTTCACGGCTACGCTCAGATTGATCACATGGTTCCACATCTTCGACCATCCCTAACGCCGCCGCCGGCTGCGTCGTCGTCGTCCTCGTTTTCTGCCTTTGCCTCCTCTGTTACAAGTACGATACTTCCTTCGCTTTATCCTGCACAGACTCAAATCAGCGATTCTGAGTACTTAGTACCTTCATCGTTTTCTTCTGCCGGTTACCCCTCCTTTTATTCTGGATGA 771 0.4994 MPMIFPDIDREKEMAAMVSALTHVLSGEVPSDYTDFHQYSTYLNTVEASATPSCSFYGASSAATISMEDGTFSQRGSSSSPAVTNREGRNGRNETRNAVYEYRAQNRREQGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVTLRPPTPNLHGYAQIDHMVPHLRPSLTPPPAASSSSSFSAFASSVTSTILPSLYPAQTQISDSEYLVPSSFSSAGYPSFYSG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1327 256 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 MobiDBLite consensus disorder prediction 70 88 - -
Lele17g1327 256 Gene3D AP2/ERF domain 113 173 IPR036955 GO:0003700|GO:0006355
Lele17g1327 256 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Lele17g1327 256 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 PANTHER DNA-BINDING DOMAIN 81 208 IPR044808 GO:0003700|GO:0009873
Lele17g1327 256 MobiDBLite consensus disorder prediction 70 97 - -
Lele17g1327 256 CDD AP2 114 173 IPR001471 GO:0003700|GO:0006355
Lele17g1327 256 SUPERFAMILY DNA-binding domain 114 172 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1327 Lele-ChrLele17 22622318 22623369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1327 105 176 AP2-EREBP Transcription Factor Family AT5G61890 77.778 1.79e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele17g1327 AP2 6.7e-15 CL0081