Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1316 ATGGATTTGGACGATTTCCGATCCATATTGGAGACTGCGGGCGTTGACGTGTGGACTTTTATCGACACCGCAATCACCGTCGCTTCCTTGGATTACGGCAATGACTTGAAGTATCGCAGGGATGGAATCGTCGAGCGCCTCTATGCCGCTACTTCCGCTCCTGCATCCTGTCGGAATTGCGAAACCAATCATCTCAGTTGTAACGGCCGCGAAATCGGCTCTCCAATCAAGAAGCAAAGCGGCCCTCTCCCCGACAAAAGTCGCGCCTCGCCTGCAACGCCGCAATCCCTGGGTAAAGACGACAACGAAGACGACGAGGAGATAGATCCTTACGGAGGTCTGTTCGATGATGAGCAGAAAAAGATTCTGGAGATTAAAGAGCTACTTGAACACCCTAGCCAGTCTGAAGAATCATTGGTGGACTTGCTACAAAATCTTGCAGACATGGATATCACATTCCAAGCGCTGAAGGAGACTGACATTGGGAGGCACGTGAATCGTTTACGAAAGCATTCGTCCAATGATGTTCGGAGATTGGTGAAGCTCCTTGTCAGGAAGTGGAAAGATATTGTCGATGAATGGGTGAAGTTTAACCCACCAGCAGAGCACGCCTCGCTTATGGCTGATGGAGACTCGCCTCAGCCCAAAACCACCTCCCAAAACGGCTATCATCAGCAGATTCCTGATTTTGCTTACTCGCCAAATCCACATAATGGGAGTTCTGGGTCGGACCGGAACAATTCAGAGGCGGAACTAAAACCAAAACCAATTCCTCGGAAAGAAGCTCCGCCAAAACCAGCGCCATCTGTCTCTATATCTGCTTCTGCTCCGCCTCAAAACAGACAAAGAGAACAGAGGGAAAGCAATTTTGACGCGGAGAGACTTGCTTCGGCTAGAAGGCGGCTTCAAGAGAACTACAAAGAAGCCGAAAATGGTGGAATTACCGTTTTAATATTTCACTTTTTCTTCGTCTTGCTAGCTCAAACCATTCAGGTGATGGACATCCATGAGCTACCAAAACCAAAAACCAAGAATGCCTTCTTTGCGAAGAACAAAGGCGGCGGCGGCGGTTCCCAGGGAAGGCACTGGTGA 1092 0.4936 MDLDDFRSILETAGVDVWTFIDTAITVASLDYGNDLKYRRDGIVERLYAATSAPASCRNCETNHLSCNGREIGSPIKKQSGPLPDKSRASPATPQSLGKDDNEDDEEIDPYGGLFDDEQKKILEIKELLEHPSQSEESLVDLLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKDIVDEWVKFNPPAEHASLMADGDSPQPKTTSQNGYHQQIPDFAYSPNPHNGSSGSDRNNSEAELKPKPIPRKEAPPKPAPSVSISASAPPQNRQREQRESNFDAERLASARRRLQENYKEAENGGITVLIFHFFFVLLAQTIQVMDIHELPKPKTKNAFFAKNKGGGGGSQGRHW 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1316 363 SMART TFS2_5 122 193 IPR003617 GO:0005634
Lele17g1316 363 MobiDBLite consensus disorder prediction 211 247 - -
Lele17g1316 363 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 116 204 IPR035441 -
Lele17g1316 363 MobiDBLite consensus disorder prediction 203 292 - -
Lele17g1316 363 MobiDBLite consensus disorder prediction 68 113 - -
Lele17g1316 363 ProSiteProfiles TFIIS N-terminal domain profile. 117 194 IPR017923 -
Lele17g1316 363 CDD TFIIS_I 119 192 - -
Lele17g1316 363 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 363 IPR044790 -
Lele17g1316 363 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 120 201 IPR035441 -
Lele17g1316 363 Coils Coil 292 312 - -
Lele17g1316 363 Pfam TFIIS helical bundle-like domain 142 191 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1316 Lele-ChrLele17 22546338 22548397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele17g1316 Med26 2.6e-12 No_clan