LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g1314	ATGCCTCTCACTCATCACTCGATCGAACCCTCAAAAATGGAAGGAAATAAGCCCTATCTGGTTGTCCTCATAGTTCAAGCAATTTATGCCGGCATGTTTCTTCTCTCTAAAGCTGCCTTCGACCACGGCATGAACAATTTCATCTTCGTCTTCTACAGACAGGCCGCTGCCACTATTTTCCTTGCCCCTTTCACTTTCTTCTTCGAACGGAAAACTGCACCGCCTTTGCCATTCCTGACCTTCTGCAAGATATTCTTTCTTTCATTCTTGGGGATAACCATGAGCTTGGACATTTATGGGATTGCCCTTGTTTACACGTCTGCAACTTTAGCTGCTGCTACTACTAACTGCCTTCCCGTAATCACTTTTTTCTTGGCCCTTCTACTCAGGATTGAAAGTCTGAAAGTGAAAACAGCACCGGGGATTGCAAAGTTGGTGGGTGTAGTGGCATGTTTGGGTGGTGCGGCGACGCTTGCCTTTTACAAAGGACCTCACTGGCAACTTTTGGGACATCATCACCTTTTGAGGTATTCTCATGCGAATGCACAAGCTCACAGTGTTCCATCTGGCACCTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAACACCTGCTGGGGGCTTTGGCTCGTACTCCAGGCCTTTGTTATAAAAGGGTACCCTTCAAAGTTGCTTCTCACAACCCTACAGTGTTTCTTGAGCTCAATTCAGTCTTTTGTCATCGCCTTTGCCGTAGAAAGGGACATTCAGCAATGGAAGCTAGGGTGGAATGTCAAACTCCTTGCCGTAGCTTACTGTGGAATAGTGGTAACGGGGGTGACATTTTACTTGCAAGCATGGGTTATAGAGAAGAAAGGGCCGGTGTTTTTGGCCATGTCGAATCCACTGGCCCTCATCATAACCATTTTCTCATCGGCAATTCTGTTAGGCGAGTTCGTAAGTTTAGGGAGCGTATTAGGAGGGGTGATATTGGTAATAGGACTATACAGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCCAAAGCCTCACTTGGAGCTTTATACTCAAGTATACAATGCGCAAGTCAAAAGGAAAAAAGAGTACATACACGGTCATATACACGTAACAAGAACCTAAAAAAATATGGGTATAGGTTGAATTTTGACTAA	1152	0.4557	MPLTHHSIEPSKMEGNKPYLVVLIVQAIYAGMFLLSKAAFDHGMNNFIFVFYRQAAATIFLAPFTFFFERKTAPPLPFLTFCKIFFLSFLGITMSLDIYGIALVYTSATLAAATTNCLPVITFFLALLLRIESLKVKTAPGIAKLVGVVACLGGAATLAFYKGPHWQLLGHHHLLRYSHANAQAHSVPSGTWIKGCFLMLLSNTCWGLWLVLQAFVIKGYPSKLLLTTLQCFLSSIQSFVIAFAVERDIQQWKLGWNVKLLAVAYCGIVVTGVTFYLQAWVIEKKGPVFLAMSNPLALIITIFSSAILLGEFVSLGSVLGGVILVIGLYSVLWGKSREQMPKASLGALYSSIQCASQKEKRVHTRSYTRNKNLKKYGYRLNFD	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele17g1314	383	PANTHER	WAT1-RELATED PROTEIN	17	343	IPR030184	GO:0016020\|GO:0022857
	Lele17g1314	383	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	252	337	-	-
	Lele17g1314	383	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	52	163	-	-
	Lele17g1314	383	Pfam	EamA-like transporter family	194	332	IPR000620	GO:0016020
	Lele17g1314	383	Pfam	EamA-like transporter family	17	144	IPR000620	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g1314	Lele-ChrLele17	22531865	22535302	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g1314	12	266	Nodulin-like Gene Family	AT5G64700	64.093	3.40e-100	296