Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele17g1308 | ATGTATGCTTCCCCTTCTTCCTCTGGCTCGCTGCTTCTCCAGGATCTTCTTGGGGATTTCCATTCCCGAAGGTTGCTCCTTCCACACAACCCACTTAACTCACAGGCCACCCCTCCAGCTTCCTTAAACACCCACAATGCCACAGACAAGTACCTCGGGAATGGCAATTTTGATGCCAATGTTGTTATGGTGCTCTCGGTGTTGTTGTGTGCTCTTATTTGCTCTCTGGGCTTGAACTCCATCATAAGGTGTGCCCTGAGGTGCTCCCATCTGGTGGTCAACATCGAGCCCGCTGGGACAAGCCCTCCGGCTCGATTGGCCAACACCGGAGTGAAGAAGAAAGCTCTCAAGACTTTCCCCACCGTAAACTACTCCGCCGACCTGAAGCTTCCAGGTTTGGACACGGAGTGCGTGATATGCTTGTCAGAGTTCGCCAATGGCGAAGGCGTCAGAATTTTGCCAAAGTGCAACCATGGCTTCCACGTGAAATGCATTGACAAGTGGCTGAGCTCACACTCGTCTTGTCCTAAGTGCAGACAGTGCCTAATTCAAACTTGCCAGAAGATTGTTGGATGCACCACGACTCAGGCTAGCTCGTCCCAGACACCTGAAACCATGATCAGGATCGCGCCTCTCGAACCAGAAGGTTTGGTCCACGACTACAGGGGAGCTGTGAGCACTTAA | 684 | 0.5234 | MYASPSSSGSLLLQDLLGDFHSRRLLLPHNPLNSQATPPASLNTHNATDKYLGNGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSHLVVNIEPAGTSPPARLANTGVKKKALKTFPTVNYSADLKLPGLDTECVICLSEFANGEGVRILPKCNHGFHVKCIDKWLSSHSSCPKCRQCLIQTCQKIVGCTTTQASSSQTPETMIRIAPLEPEGLVHDYRGAVST | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele17g1308 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 184 | IPR013083 | - | |
Lele17g1308 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 179 | IPR001841 | - | |
Lele17g1308 | 227 | Pfam | Ring finger domain | 136 | 179 | IPR001841 | - | |
Lele17g1308 | 227 | SUPERFAMILY | RING/U-box | 116 | 184 | - | - | |
Lele17g1308 | 227 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 15 | 217 | IPR044602 | GO:0016567|GO:0016740 | |
Lele17g1308 | 227 | CDD | RING-H2_PA-TM-RING | 136 | 179 | - | - | |
Lele17g1308 | 227 | SMART | ring_2 | 137 | 178 | IPR001841 | - | |
Lele17g1308 | 227 | FunFam | RING-H2 finger protein ATL73 | 99 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele17g1308 | Lele-ChrLele17 | 22511076 | 22511759 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele17g1308 | 24 | 183 | C3H Transcription Factor Family | AT3G10910 | 46.512 | 1.69e-40 | 135 |