Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1306 ATGCAATGCTCGATCAAGAGAGCTGAAGCTGTTGAAGCACACAACTGGGCTCTAGCCTCAGACATCATTAAGAAGATTAAAGATGACTTGTGTGTGGAAAATGGAGATAGTTTATTGAATAGGTTGGCTCTTTTCTTTACTCAAGCCAGCCAAGCTATCTTTGAAGCCACTGAAGGTGATCGAGAGATCCATGTCATGGATTTTGACATCATGGAGGGAATCCAGTGGCCGCCTTTGATGGTTGACCTGGCAATGAGGAAGAACACTACCCTTAGAGTAACAGCCATCACATTGGACCATCACAGTGCCGCCGCCATCCAACAAACGGGAAGAAGCTTACAAGAGTTTGCCGCCTCTATCAATTTCTCATTCACGTTAGATCAAATAATGATTACAGGTGAAGAAGATTTTAGAAGAATCATATTGGGTCCTACACTTATAGTAAATTGTATGATACACCAGTGGATGCCCAACAGGAGTTTCTCGCTGATCAGAACTTTCCTGGATGGAGTAAGCAAATTATCCCCTAAGCTTGTTATTTTAGTAGAAGGTGAACTATTCAATTTTTCTAGGCTCAAATCTATGTCCTTTGTGGAGTTCTTCTATGAGGCTTTGCTCCTTTATACAGCAATTTCTGATTCACTTGCAAATGGCGGGGTTGCATCAAACATGGAATCCAAAACCAACTTCATTACCTCCAAAAACGTCAGGGTAGGAGACTATGTTCTGAAGACGAAGATAGGGGAAGGTTCTTTCTCCACAGTGTGGAGAGCCGAGCACGTATTGAGTGGCGATGAAGTGGCAGTGAAACAAGTTTGCCTTTCCAGCCTCAATCGACGCCTCAAGAGCAGCTTTGATTTCGGAATCAATTTCTTATCCTCCGTCGACCACCCTAATATAATTCGCCTTCTTGACGTTTTACAGGAAGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAACTTGGCTTCTTACATTCAGCGCCATGGGAGAGTTCAACAACAAATTGCTAGAAAATTCACGCAGCATCTTCGCTCTGCTTTAAAAATATTGCACTATCGGGGTATCATTCACAGGGACCTGAAGCCAGAGAACATTTTGTTATCAAGCCAAGGGGATGATTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCGTCAGGGTGAATATGCCGAGATCGTTTGTGGGTCTCCATTATACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGACATGTGGAGCGTTGGTGCCATTCTTTTCGAGCTTCTAAACGGCTATCCACCCTTCAATGGAAGGAATAATGTACAGCTGTTGAAGAATATCAGATCCTGCACATGTCTTCCATTTTCTCAGCGAATCCTTTCAGCATTAGACCCTGACTGTCTTGATATGTGTTCTAGACTCCTGTGCTTAAATCCAGAGGAGCGTCTATCATTTGATGAATTTTATGGGCATAGGTTCCTAATAAATCAAAATATGTCGGGAGAGGATGGCCACCTGAAGGCGGCGAAGACAGCTTACCGGAATGCCAAGGCCGTGGGGAATCGGCGGGAGGAGGCGCGGTGGGCCAACGTGAGCGGAGATTTGTTGAAGAACAGAGGAGAATACGTTGAGGCCCTCAAATGGCTTCGTATAGATCATGATATTTCCCTCAAGTATTTGCCTGAGAAGCATTTGCTCCCAACTTGTCAGTCTCTTGGAGAGATCTACCTTCGACTTGAGCATTTCACTGATGCTCTTACTTATCAGAAAAAGCATTTGGAGCTTGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGAGCCAGCACCCAACTGGGTCGTACTTACTATGAACTATTTTCAAGATCAGAGCATGACCACAACTCAATACGAAATGCCAAAAAGTATTTTAAGTCCGCTATGGAACTGGCACAGATTATTAAGGAGAACCCGCCAACTAGTTACTCTTCCCATGTAAAGGAATATATTGATGCACACAACAATAGAGGTATGCTTGAAATGGAACTTGATAACTTGCAAGAGGCTAAGAAAATCCTAAGCCGAGGACTTAAGATTTGCGATGAAGAAGAGGTCAGCAGAGATGATGATGGGCGCAGCAGGCTGCATCATAACCTTGGAAATGTGTATATGGAACTGAGAAATTGGAATAAAGCTAGAAATAATATTGAGAGGGACATTCAGATTTGTAATCGAATTGGCCATCGTCAAGGGGAAGCAAAGGGCTATATTAATCTTGGTGAAGTGAATTACAGGACTCAGAAGTATGAGGAAGCCCTTTCGTGTTACAAAAAGGCTCTGCTTCGGGCAAAGTCCCTGGAAGATGAGGATGCTTTGGTCAGGCAAATTCATCAAAATATCAAAATTGTAAATGAAGCTATCAAGGTAATGGATGAATTAAAGATAGAAGAGCAGAACCTCAAAAAGCTTGAAAGAGATGTGGCCACTGCAAGAGGCACCCCACATGAGCGGAAACATCTGCTGCTGCTAAATAAATCCATTGACTGCCTCCTCGAGAAATTGGGCATAATTTTTGCGTTTTCTGTTGAACCTTTAGTACTCCCTTTTGTCATGCCTAAGAATAAAGTTACATTGCATTGCAAATTTGCAAAGAAGAAGAAGGAAATAGTCCGTGAACTTTGTGACAAGGAAAAGCTAGCTGATTCATATATGGCTGTGGGAGAATCATACCAGAAGCTCAGGGAATTCAATAAAGCAATTAAATGGTACACAAAAAGTTTAGAAACGTACAGAATTATTGGTAACTTAGAGATTGTACCGAACAATCTTCGTCCCATGACTGTAACCTGGATTGCTGTTGAAGCTAACCTTCATTCAGTGCAGCTTTCTGCTCTGGAGAATATGCACTATAGTAACATGATGAGATTTGATGATGAGAATGAGACCAGGCGGTTGAAAAATCTAATTGATAAGCTGAAGAAGTCAATAGAGAAACAGCCTGAAACAAAAGACATGCCAGAGGACTACTGCTCTGAGACTGACACAGAAGCAAATTTTTATTTGTCGGATAGTGGGTCTGATGCATTCTCCTCCCCCAAGACATCATATAGATCAAAAAATACAAGTGCTGAAGAAGAGTGGAATGAAGATGCGCCTCTGGCTTCTCTCTTTCAGTCCATTAGAAGTTCATCTAGAAAAATAACAGGTCATATAGAAAGTCCAAGCAACTCTCCCAAACAAACTGAGCAGTCACCCGAAAGCGATCCAAATCCTACCAGTAATCATCAGACGGTTGTTGGCCGTAAGCGCATCCGTATAATCCTTTCTGATGATGAGATGGAGTGTTTAAACAGAAAGGATCATCGGGGCCTATTGGAGGATGCCGCCACTTGTGATGCGACTAAGAGTGCGAGAAGTGTCGGTCCTGCTGGTAAGCTTCAGGTTGACATGCTGTGTGGAACCAATTGTGCAATTAATGTTGAGGATAGCAGTAGTTCTTTCAAACGCATGAGTCCTCATAGAGATAGCATAGCTGTCAGACGTTCGAGATCTTTGAGCAATGATATGATTGCTGAGCCTGATTTTGCTGGTAGTTCTAAATGCGATACGAATATTTCTGGGAGATTGTTGCAACATGATGTTACCCGTCCTGTTTTGCATGATTCTGAAAATTACCAGTATATTACATTTAAGATTGAAGATGACTTTATTCATGTGGAAGCAACTTCATGCATTGTTGATGCTCAGTTGAATATTGAGTCTTTGAAGGCCGAAGTTGCGTGCTTATACTATCTGCAACTTCCCATAGAGAAAAAATCAGAAGGTTTGTTGCCCGTTGTTCAACACTTGAAATGTGCCGGAAGATATATAGAATCCCCGGAAACTGTCGAAAATTTCAAGGAACATCTGGGAAATGACGTCGTTGAAGCTTCTATTGTTGGATGGGTTCAAAAGCGTCTTATAAAAATGTACATGGATAGCTGCAAGGAGTTGTCTGAGGTAGCAAACATGAAGGTACTCAAGAAGCTTTACAATTTAGAGGTGTCAGATGATGAGATCATTGTGTCTGATTGTGACTTGCAAGATTTGTCGGTGACGCCGCTGTTAAATGCACTGCATTCGCACAAAACATTTGCCATGCTTGACCTCTCTCATAATTTGTTAGGAAATGGGACGATGGAGAAACTTCAGAAGGTGTTCTCTGAATCAGGACAAACTTATGGGGGCTTGACTCTAGATTTGCATTGCAACAAGTTCGGCCCTACTGCTTTATTTCAGATTTGTGAATGCCCGGCAGTATTTGCTCGACTGGAAGTGCTGAACATTTCTGGGAACCGTCTTACTGATGCATGTGGGTCTTACCTTTCAACAGTCTTAGCAAAATGCACAGTTCTCTGTAGCTTGAATGTGGAGAACTGTCATATCACAACCAGAACTATCCAAAAGATTGCTGATGCATTGGACTCTAACTCTGCACTTGCTCAGCTTTGTATAGGATACAACAGTCCTGTAGCTGGAAATGCTATTGTTAATCTACTCGCCAAGCTTTCTACAATGAAAAGGTTTTCTGAGCTGAACTTAAGTGGTTTAAAACTAGGCAAACCTGTTGTTGATTCCCTGTGCAAGCTAGCTGGGAGTACAAATTTGTCAGGAATGATGCTCGGAAGCACCGGCATTGGAACTGAAGGGGCAATGCAATTAGTAGAATCATTGTCCAGAGGGACTCGAGAGCTTGTGAAACTTGATCTGTCATATTGTCAGCTCATATCCAATTATGTTTTAAACACCAGTTTTAATTTATTCTGTTCTATGCTAGAGCTTAATCTGCAAGGAAATCCTATTACGCCCGAGGGAAGGGATTGTCTATCTTCTCTTCTCATGAGTCCACAGTGCTGCCTAAGAGTTTTGGTCCTTAGAAAATGTCAGCTTGGGCTTGCCGGAATTCTTCGCATAACAGAGGCACTAGCAGAGAACAACTACCTGGAGGAGCTTAATCTTTCTAGTAATGCTGTTCCGAATGAACTTCACCCCTTACAACTCGATTTCTCAGCTGAAGGACCCTCACAAATTGTAGAGACTCGTAAGGAGGATTTACCCATGATAGTGGCTGATAATGAAGAGCCCCTTTGTGTTCTTAACACTGACTACCTTCAGCTCGAAGTTGCTGACAGTGAAGATAGTCTGGCGGCTAGAGTCGGAGGCGGTGCTTCTGGAATTGATGACAGTTTTGCTGATTCGTATCAAAGAAACTCTTCATCTCCTGATTGCAAATTCATTGAACAACTTTCAACTGCTATTGCTATGGCAAAGCACTTGCAATTGTATGACATTAGCGATAATGGTTTCTCCACTGAAGCTGCAGAAACATTCTATCGTTCTTGGGCATCAACATTACGAGCCGTTTCAAGTCAGAAGCACATCACAGATGGCATTGTTCATTTTGAAACGAAGGAAAATGGGTGCTGCAGAGTGAAACCATGCTGCAAGAAGTATTGA 5490 0.4239 MQCSIKRAEAVEAHNWALASDIIKKIKDDLCVENGDSLLNRLALFFTQASQAIFEATEGDREIHVMDFDIMEGIQWPPLMVDLAMRKNTTLRVTAITLDHHSAAAIQQTGRSLQEFAASINFSFTLDQIMITGEEDFRRIILGPTLIVNCMIHQWMPNRSFSLIRTFLDGVSKLSPKLVILVEGELFNFSRLKSMSFVEFFYEALLLYTAISDSLANGGVASNMESKTNFITSKNVRVGDYVLKTKIGEGSFSTVWRAEHVLSGDEVAVKQVCLSSLNRRLKSSFDFGINFLSSVDHPNIIRLLDVLQEDGCVYLVLEFCAGGNLASYIQRHGRVQQQIARKFTQHLRSALKILHYRGIIHRDLKPENILLSSQGDDSVLKIADFGLSRTLRQGEYAEIVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELLNGYPPFNGRNNVQLLKNIRSCTCLPFSQRILSALDPDCLDMCSRLLCLNPEERLSFDEFYGHRFLINQNMSGEDGHLKAAKTAYRNAKAVGNRREEARWANVSGDLLKNRGEYVEALKWLRIDHDISLKYLPEKHLLPTCQSLGEIYLRLEHFTDALTYQKKHLELARDANDLVEQQRASTQLGRTYYELFSRSEHDHNSIRNAKKYFKSAMELAQIIKENPPTSYSSHVKEYIDAHNNRGMLEMELDNLQEAKKILSRGLKICDEEEVSRDDDGRSRLHHNLGNVYMELRNWNKARNNIERDIQICNRIGHRQGEAKGYINLGEVNYRTQKYEEALSCYKKALLRAKSLEDEDALVRQIHQNIKIVNEAIKVMDELKIEEQNLKKLERDVATARGTPHERKHLLLLNKSIDCLLEKLGIIFAFSVEPLVLPFVMPKNKVTLHCKFAKKKKEIVRELCDKEKLADSYMAVGESYQKLREFNKAIKWYTKSLETYRIIGNLEIVPNNLRPMTVTWIAVEANLHSVQLSALENMHYSNMMRFDDENETRRLKNLIDKLKKSIEKQPETKDMPEDYCSETDTEANFYLSDSGSDAFSSPKTSYRSKNTSAEEEWNEDAPLASLFQSIRSSSRKITGHIESPSNSPKQTEQSPESDPNPTSNHQTVVGRKRIRIILSDDEMECLNRKDHRGLLEDAATCDATKSARSVGPAGKLQVDMLCGTNCAINVEDSSSSFKRMSPHRDSIAVRRSRSLSNDMIAEPDFAGSSKCDTNISGRLLQHDVTRPVLHDSENYQYITFKIEDDFIHVEATSCIVDAQLNIESLKAEVACLYYLQLPIEKKSEGLLPVVQHLKCAGRYIESPETVENFKEHLGNDVVEASIVGWVQKRLIKMYMDSCKELSEVANMKVLKKLYNLEVSDDEIIVSDCDLQDLSVTPLLNALHSHKTFAMLDLSHNLLGNGTMEKLQKVFSESGQTYGGLTLDLHCNKFGPTALFQICECPAVFARLEVLNISGNRLTDACGSYLSTVLAKCTVLCSLNVENCHITTRTIQKIADALDSNSALAQLCIGYNSPVAGNAIVNLLAKLSTMKRFSELNLSGLKLGKPVVDSLCKLAGSTNLSGMMLGSTGIGTEGAMQLVESLSRGTRELVKLDLSYCQLISNYVLNTSFNLFCSMLELNLQGNPITPEGRDCLSSLLMSPQCCLRVLVLRKCQLGLAGILRITEALAENNYLEELNLSSNAVPNELHPLQLDFSAEGPSQIVETRKEDLPMIVADNEEPLCVLNTDYLQLEVADSEDSLAARVGGGASGIDDSFADSYQRNSSSPDCKFIEQLSTAIAMAKHLQLYDISDNGFSTEAAETFYRSWASTLRAVSSQKHITDGIVHFETKENGCCRVKPCCKKY 1829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1306 1829 ProSiteProfiles TPR repeat profile. 751 784 IPR019734 GO:0005515
Lele17g1306 1829 MobiDBLite consensus disorder prediction 1019 1036 - -
Lele17g1306 1829 ProSiteProfiles TPR repeat profile. 898 931 IPR019734 GO:0005515
Lele17g1306 1829 Gene3D Transferase(Phosphotransferase) domain 1 322 504 - -
Lele17g1306 1829 Pfam Protein kinase domain 241 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1306 1829 Pfam Tetratricopeptide repeat 898 926 IPR019734 GO:0005515
Lele17g1306 1829 SMART LRR_RI_2 1373 1400 - -
Lele17g1306 1829 SMART LRR_RI_2 1460 1487 - -
Lele17g1306 1829 SMART LRR_RI_2 1599 1626 - -
Lele17g1306 1829 SMART LRR_RI_2 1544 1571 - -
Lele17g1306 1829 SMART LRR_RI_2 1432 1459 - -
Lele17g1306 1829 SMART LRR_RI_2 1628 1655 - -
Lele17g1306 1829 Pfam Tetratricopeptide repeat 711 778 - -
Lele17g1306 1829 Pfam GRAS domain family 45 225 IPR005202 -
Lele17g1306 1829 MobiDBLite consensus disorder prediction 1062 1099 - -
Lele17g1306 1829 ProSiteProfiles GRAS family profile. 1 320 IPR005202 -
Lele17g1306 1829 Coils Coil 801 831 - -
Lele17g1306 1829 SUPERFAMILY RNI-like 1336 1792 - -
Lele17g1306 1829 Gene3D Tetratricopeptide repeat domain 878 1009 IPR011990 GO:0005515
Lele17g1306 1829 ProSiteProfiles Protein kinase domain profile. 241 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1306 1829 ProSitePatterns Protein kinases ATP-binding region signature. 247 270 IPR017441 GO:0005524
Lele17g1306 1829 SUPERFAMILY TPR-like 660 928 IPR011990 GO:0005515
Lele17g1306 1829 PANTHER PROTEIN TONSOKU 504 935 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Lele17g1306 1829 Pfam Leucine Rich repeat 1601 1621 IPR001611 GO:0005515
Lele17g1306 1829 Gene3D Ribonuclease Inhibitor 1321 1718 IPR032675 -
Lele17g1306 1829 FunFam Protein TONSOKU 505 660 - -
Lele17g1306 1829 SMART tpr_5 711 744 IPR019734 GO:0005515
Lele17g1306 1829 SMART tpr_5 898 931 IPR019734 GO:0005515
Lele17g1306 1829 SMART tpr_5 668 701 IPR019734 GO:0005515
Lele17g1306 1829 SMART tpr_5 751 784 IPR019734 GO:0005515
Lele17g1306 1829 SMART tpr_5 571 604 IPR019734 GO:0005515
Lele17g1306 1829 MobiDBLite consensus disorder prediction 1019 1048 - -
Lele17g1306 1829 MobiDBLite consensus disorder prediction 1062 1097 - -
Lele17g1306 1829 FunFam Maternal embryonic leucine zipper kinase 234 513 - -
Lele17g1306 1829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Lele17g1306 1829 SUPERFAMILY TPR-like 517 702 IPR011990 GO:0005515
Lele17g1306 1829 SMART serkin_6 241 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1306 1829 FunFam Protein TONSOKU 1325 1696 - -
Lele17g1306 1829 SUPERFAMILY Protein kinase-like (PK-like) 237 500 IPR011009 -
Lele17g1306 1829 ProSiteProfiles TPR repeat region circular profile. 751 778 - -
Lele17g1306 1829 Gene3D Tetratricopeptide repeat domain 505 819 IPR011990 GO:0005515
Lele17g1306 1829 Gene3D Phosphorylase Kinase; domain 1 226 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1306 Lele-ChrLele17 22484865 22500258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1306 231 488 CBL-interacting serine-threonine protein kinases AT5G35410 39.163 2.35e-47 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele17g1306 Pkinase 5.7e-66 CL0016
TF GRAS Lele17g1306 Pkinase 5.7e-66 CL0016