Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1254 ATGAAGGGTGAATTAGAGTTACCGCCAGGATTCAGATTTCACCCGACGGATGAGGAGTTGGTGAATTACTATCTCTGTAGGAAATGTGCTTCCCAGTCTATTGCTGTTCCTATTATAAAAGAGATTGATTTGTACAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATACGGAGAGAAAGAATGGTACTTCTTCTCACCAAGGGACAGAAAATATCCAAACGGATCAAGACCCAACAGGGCCGCGGGAAGCGGGTACTGGAAGGCGACCGGAGCTGACAAGGCCATCGGAAAGCCTAAACCTCTCGGAATCAAGAAGGCACTCGTTTTCTACGCCGGTAAAGCCCCCAAAGGCATCAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGATCGCTCTGCTCGCAAGAACAACAACTTGAGGCTTGATGATTGGGTATTGTGCCGGATTTACAACAAGAAAGGTGTGATTGAGAAATACAACACCCAGGATCAGAAATCGACCAAGTTTTTCTCAGATGTAGATGAGCACGAAACTAAACCAGTAATCAACATGCTCGCCAATGACCAATTGTACATGGACACGTCGGAATCGGTGCCGCGGTTGCACCCGGACTCCAGCTGCTCCGAGCACGTGCTGTCACCGGACGTCACGTACTGCGACAAGGAGGTGCAGAGTGAGCCCAAGTGGAATGAGATGGCTCTGGGATTGAAAGACGACGCCTTCGATTTCGAGTTCAATTACATGAACAATATGAATGGTAACAACACGGGATATGACGCTTTTGCCCCTCAGGTCCAGTACCAAATGAACCAGCTCTCACCCTTACAGGACATGTTCATGTATCTCCAGAAACCATTTGAAACACAAATTCACCAAGAGGGAAGATTGGACCCCACATATTATTAA 921 0.4723 MKGELELPPGFRFHPTDEELVNYYLCRKCASQSIAVPIIKEIDLYKFDPWQLPEMTQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGVIEKYNTQDQKSTKFFSDVDEHETKPVINMLANDQLYMDTSESVPRLHPDSSCSEHVLSPDVTYCDKEVQSEPKWNEMALGLKDDAFDFEFNYMNNMNGNNTGYDAFAPQVQYQMNQLSPLQDMFMYLQKPFETQIHQEGRLDPTYY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1254 306 FunFam NAC transcription factor 16 161 - -
Lele17g1254 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 218 - -
Lele17g1254 306 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Lele17g1254 306 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Lele17g1254 306 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lele17g1254 306 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1254 Lele-ChrLele17 22180794 22182127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1254 1 291 NAC Transcription Factor Family AT1G01720 62.914 1.59e-126 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele17g1254 NAM 3.2e-39 No_clan