Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g1238 | ATGGATAAGTACGAGGAGGTGAAGGATTTGGGAGCGGGCAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTCGCAAGATTGATGAGAACGTGGCCAGAGAGATTATGAACCATAGGTCCCTTCGACACCCCAATATAATTCGATTCAAGGAGGTCATTTTGACTCCCACACATTTAGCAATAGTAATGGAGTATGCTGCTGGAGGGGAATTATTTGAGAGGATATGCAATGCTGGCAGATTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTTAATTTCTGTCACACCATGCAAATATGCCACAGAGATTTGAAGCTTGAAAATACCCTTTTGGATGGAAGTCCTGCACCTCGCTTGAAAATATGCGATTTCGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAGTCTACGGTTGGAACTCCAGCTTATATCGCACCTGAAGTTCTTTCGAGGCGCGAATATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGGGTGACTCTTTATGTCATGCTTGTTGGAGCATATCCCTTTGAGGACCAAGATGACCCAAGGAATTTCCGTAAAACAATCCAGCGAATAATGGCTGTTCAATACAAAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGTGGCTAATCCATTGAGGAGAATAACAATAAAGGAAATCAAGATCCACCCATGGTTTCTGAAGAACCTACCAAGGGAATTAACGGAATCAGCACAGGCGGTGTATTATCAGAGAGACAATCCAAACTTTCAGGGTCAGAGTGCGGAGGAAATAATGAGGATTGTTGGAGAGGCAAGAACCCCGCCACCAGTATCGAGGCCGGTCAAAGGTTTTGGGTGGGAAGGTGAAGAAGAGGAAGAAGGAGGAGGAGCAGAAGAAGGAGAAGAGGCAGAGGAGGAGGAGGAAGATGAAGAAGAAGATGAGTATGACAAGAGGGTGAAGGAGGTTCACGCAAGCGGCGAATTTCAAGTCAGTTGA | 1080 | 0.4574 | MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGRKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRITIKEIKIHPWFLKNLPRELTESAQAVYYQRDNPNFQGQSAEEIMRIVGEARTPPPVSRPVKGFGWEGEEEEEGGGAEEGEEAEEEEEDEEEDEYDKRVKEVHASGEFQVS | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g1238 | 359 | MobiDBLite | consensus disorder prediction | 303 | 359 | - | - | |
| Lele17g1238 | 359 | FunFam | Serine/threonine-protein kinase SRK2E | 1 | 79 | - | - | |
| Lele17g1238 | 359 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
| Lele17g1238 | 359 | Pfam | Protein kinase domain | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1238 | 359 | ProSiteProfiles | Protein kinase domain profile. | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1238 | 359 | SMART | serkin_6 | 4 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1238 | 359 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 119 | 131 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele17g1238 | 359 | MobiDBLite | consensus disorder prediction | 318 | 343 | - | - | |
| Lele17g1238 | 359 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 298 | IPR011009 | - | |
| Lele17g1238 | 359 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 79 | - | - | |
| Lele17g1238 | 359 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 268 | - | - | |
| Lele17g1238 | 359 | PANTHER | SERINE/THREONINE KINASE | 3 | 310 | - | - | |
| Lele17g1238 | 359 | CDD | STKc_SnRK2 | 3 | 259 | - | - | |
| Lele17g1238 | 359 | FunFam | Serine/threonine-protein kinase SRK2A | 80 | 268 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g1238 | Lele-ChrLele17 | 22101627 | 22103960 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g1238 | 3 | 282 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 41.837 | 2.94e-68 | 218 |
Transcription factors information