Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1236 ATGGAAAGAAATTTGTGGTGGATTACGAGAGAAAAGTTGCAGAAGATGGTGAGGAAAACATTTGGGCTCTTCCTCTTGGTGCTCGTTGTGCTAGCTGCTGAAGTGGCGGTGCAGACGGAGGGAAGGATGTGCCAGTCACAGAGCCATGGGTTCAGGGGACAGTGCTGGCGCCACCACAACTGTGCGCTGGTGTGCAGGAACGAAGGTTTCTCCGGCGGCCGCTGCCGAGGGTTCCGTCGCCGCTGTTTCTGCACTAGGCGCTGTTGA 267 0.5655 MERNLWWITREKLQKMVRKTFGLFLLVLVVLAAEVAVQTEGRMCQSQSHGFRGQCWRHHNCALVCRNEGFSGGRCRGFRRRCFCTRRC 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1236 88 ProSitePatterns Gamma-thionins family signature. 42 65 IPR008176 GO:0006952
Lele17g1236 88 PANTHER DEFENSIN-LIKE PROTEIN 1 20 85 - -
Lele17g1236 88 Pfam Gamma-thionin family 42 88 - -
Lele17g1236 88 SUPERFAMILY Scorpion toxin-like 42 88 IPR036574 -
Lele17g1236 88 Gene3D - 42 88 IPR036574 -
Lele17g1236 88 PRINTS Purothionin signature 43 58 IPR008176 GO:0006952
Lele17g1236 88 PRINTS Purothionin signature 73 87 IPR008176 GO:0006952
Lele17g1236 88 SMART gth_4 43 88 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1236 Lele-ChrLele17 22094042 22096912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1236 16 88 Plant Defensins Gene Families AT5G63660 57.534 1.00e-26 91.7