Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1235 ATGATGATCTCCCTGCTGCGAGAAAGAGCACACCAACAAAGGCGCCTGGACCAAAGAGGAAGACCAACGCCTCATCAGCTACATCAAGCTCCATGGCGAAGATGGTCCCTGATCGCCGCGAGGTTACGGGGAAGAACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAACTCTACAGCCGCGGTATTGACCCTCAAACGCATCGGCCCCTCAACGCCGCTACCGTTGCCACCACCACCACAGATACCGGTGCTGTTGTCAGCAGCGGCAGCAACAACGATAATGCCACCAAGTTTCAGTTAGTGACTGAGTTGGGTGGCGCCAACAACAATAACAATAATGCGAAGAATATCGTAAAAACCGAATCGGCCTGCGAAGACTCCAACAGCAGCAGCGGGGTTACCATAGAAGAAGCCACCCCCTATGCGCATGCTCAGCTCAACTTGGAGCTCACCATAGGCCTTCCCTCTGATCAGCCTTCTTCCGTAAACCAAGACAAGTTTATTAAAGGACAGCAACCTCGGCCAGAACAACAACAACAACAAATCTTGTACCACTGGTATGGCAACTTTAGTAGTTCAGGTCAAGGTGTGTGTTTGTGTTACGGTCTAGGGTTTCAGAGTAAGGATCAAGCATGTAGCTGCAAATTAGCCATGGGTGCTTCTGTTGTTGTTCCTGCTACTACCCCTCCCACTGTTACTGAAACTGCCACCGATAATATGTATAGATTTTACACGCCCAGGAACATTTAG 765 0.498 MMISLLRERAHQQRRLDQRGRPTPHQLHQAPWRRWSLIAARLRGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAATVATTTTDTGAVVSSGSNNDNATKFQLVTELGGANNNNNNAKNIVKTESACEDSNSSSGVTIEEATPYAHAQLNLELTIGLPSDQPSSVNQDKFIKGQQPRPEQQQQQILYHWYGNFSSSGQGVCLCYGLGFQSKDQACSCKLAMGASVVVPATTPPTVTETATDNMYRFYTPRNI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1235 254 Gene3D - 8 83 - -
Lele17g1235 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 62 IPR017930 -
Lele17g1235 254 SUPERFAMILY Homeodomain-like 29 71 IPR009057 -
Lele17g1235 254 ProSiteProfiles Myb-like domain profile. 1 58 IPR001005 -
Lele17g1235 254 MobiDBLite consensus disorder prediction 1 28 - -
Lele17g1235 254 MobiDBLite consensus disorder prediction 8 22 - -
Lele17g1235 254 CDD SANT 33 58 IPR001005 -
Lele17g1235 254 Pfam Myb-like DNA-binding domain 29 57 IPR001005 -
Lele17g1235 254 PANTHER F14D16.11-RELATED 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1235 Lele-ChrLele17 22086572 22087861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1235 26 222 MYB Transcription Factor Family AT1G22640 34.500 7.19e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele17g1235 Myb_DNA-binding 1.7e-05 CL0123