Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1234 ATGGATTACTGGGCTATCATATTTCTTACTGCACTTAAGATTTGCGTGCTTGAGAACTTTGTAGGGATGGATAATTGTCGTCACCAAGTTGCGTTCATTGGCCAGCATGAGGAAAATGAAAGTAAACTTCTATTGGACATTCCAAAAGATTTGAAAGATGTTGATGAAGAAACTATCAACACTGAAACTTTGTTCATACCAGTATTTAAGAAAAGAAAGCGACTTAGCCTTAATCAGCTCAGAGAGATAAAAGCAGGGTTAGGTGGGAAGCAGAATCAAACTAGTAGCAAGCTTCAAACAAAGAAGCATGAGAGTAGAGACAGATGGTCATCTGAGAGATATAAGCTTGCTGAGCAAAGCATGTGGGAGGTCTTGAAGGCTAAAGGGGCAACGTTTGCCAACCCAATCTCCCGACCTGCACTAAGGATGGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGTGGGACTGAGCGTTTTAGGCGGTGGTTTAACACCAAAGGAATCATGGAGTATTGGTTGGAGAGTGCTAACCTAGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCCTATTGGATTCCGCCTCCTACATTTAAAGCAGGCAGTCCCCCTCTTCAAAATTCTGATTCTTCTGGCCAACTGAAACTGCTTCAAACAGAAATGGCCAAAATGAAGAAAGACATGCAGGAGCTCATAATAATCAAGAACCAAGAGAAAAATGAAATTAATATGATGGAGGAGACACGCAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTTGACTTCTTTGAAGGGTGTACAGGGTATGTATGGTGATTTGGTAATTTGGAAAAGTAAAGTTGAGCAACAGCTTGTGGAAATAACAAATAAATTGAGTGATCTGAAAGCATCAAGGGAAGGCACGACCAATCCTCCTTTAGAAAGATGGGAAGATTGGCTTGAAAGCACCAATCTAGAGAATATTCGGGAAGATGATGAGCTAATACCATGGTTTGGGAGTACGGAACTGGTTAATCTTGAGCAAGAAGTTGCCCTTCAAGATCCTAACTCAGCCCTACCTAGTCAGCTGCTCAATAACAATCTGACTAACATGAAGAGTGATTTGCTGGAAATGTTGCCTAACAAACAAGAGGAAGATCAACCTAATGTGACTCCGGATTCTTCTATGACTGATAATTCAAAGTCAGACCTTGACAACCCAGTGATGATGTTTCAGGAGATGCTCACGGACTTGTTTAAATGGAAAGACAAGATGGAGAAGCAGATGACCGAGCTATCAAATTATGTAAATGGAATGCTGGCGACCAAGGAGCTCCACTTTTAA 1389 0.4226 MDYWAIIFLTALKICVLENFVGMDNCRHQVAFIGQHEENESKLLLDIPKDLKDVDEETINTETLFIPVFKKRKRLSLNQLREIKAGLGGKQNQTSSKLQTKKHESRDRWSSERYKLAEQSMWEVLKAKGATFANPISRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESANLDKVRQDAGVQDPYWIPPPTFKAGSPPLQNSDSSGQLKLLQTEMAKMKKDMQELIIIKNQEKNEINMMEETRKELVKWKAMTEQRLTGILTSLKGVQGMYGDLVIWKSKVEQQLVEITNKLSDLKASREGTTNPPLERWEDWLESTNLENIREDDELIPWFGSTELVNLEQEVALQDPNSALPSQLLNNNLTNMKSDLLEMLPNKQEEDQPNVTPDSSMTDNSKSDLDNPVMMFQEMLTDLFKWKDKMEKQMTELSNYVNGMLATKELHF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1234 462 Coils Coil 229 263 - -
Lele17g1234 462 MobiDBLite consensus disorder prediction 399 420 - -
Lele17g1234 462 Coils Coil 299 319 - -
Lele17g1234 462 MobiDBLite consensus disorder prediction 88 110 - -
Lele17g1234 462 PANTHER PROTEIN DYAD 368 456 IPR044221 GO:0007131|GO:0051177|GO:0051321
Lele17g1234 462 MobiDBLite consensus disorder prediction 398 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1234 Lele-ChrLele17 22077052 22079571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1234 108 189 PHD Transcription Factor Family AT5G22260 42.169 6.55e-07 50.1