Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g1231 | ATGAAGAAAGCGAGCACAGCCACTTTTCCATCAAAATCCTTATGGGTTCTCCCCTATCGAACCCAAAGCCTCCCTGACCTTTACACCCTGGGAAGGAAATTGGGTCAGGGTCAATTTGGCACAACCTTCCTCTGCACAGAAAAGTCCACTGGTCGTACATATGCCTGCAAGTCAATCCCTAAGCGTAAGCTAATCTGCCAAGAGGATTACGACGACGTTTGGAGGGAGATTCAGATCATGCACCATTTGTCCGAGAATCCCAACGTCGTCAGAATCCATGGCACTTACGAGGACTTGTCCTCTGTTCACCTGGTCATGGAGCTCTGCGAAGGTGGAGAGTTGTTCGACAGGATAGTGCAGAAAGGGCATTACAGTGAGAGGCAAGCGGCTACGTTGATCAGGACCATTGTTGAGGTTGTCCAAGCTTGTCATTCTCTTGGGGTCATGCATAGAGACCTCAAGCCAGAGAACTTCTTGTTCGATAGTGTCGAAGAGGATGCCAAACTTAAAGCCACTGATTTCGGATTGTCTGTTTTCTACAAGCCAGGTGAAACCTTTTCTGATGTTGTTGGGAGCCCATACTATGTTGCACCAGAGGTGTTACGCAAGCATTATGGACCCGAGTCAGATGTGTGGAGTGCTGGGGTTATTTTGTACATCTTATTAAGTGGGGTGCCGCCTTTTTGGGCTGAAAGTGAAATAGGGATCTTCCGACAGATTTTGCAAGGAAAACTTGATTTTCAGTCAGAACCATGGCCTAACATCTCAGAAAGTGCCAAGGATCTAATTAGAAAAATGCTCGATCAAAATCCGAAAAAGAGGCTTACGGCCCATGAAGTACTCAGCCACCCATGGATTGTTGATGACAATATCGCACCTGATAAACCCCTCGACTCTGCTGTTTTATCACGCCTGAAACAGTTCTCTGCAATGAATAAGCTTAAAAAGATGGCTTTACGTGTTATTGCTGAGAGGCTCTCTGAGGAAGAAATTGGTGGACTGAAGGAGTTATTCAAGATGATTGACACAGACAACAGCGGAACCATAACTTTTGACGAGTTAAAAGATGGTTTAAAGCGAGTGGGGTCTGAACTCATGGAGTCTGAAATCAGGGATCTTATGGAAGCGGCGGATATTGATAATAGTGGAACAATTGACTATGGTGAATTCATTGCCGCGACTGTCCACTTAAATAAGCTGGAGAGGGAGGAAAATCTGTTGTCTGCTTTCTCTTATTTTGATAAAGACGGTAGTGGTTACATAACCATTGATGAGATTCAACAAGCCTGCAAGGACTTTGGTTTAGGCGATGCCCATATTGATGAAATGATCAAGGAAATCGATCAAGACAATGATGGACAAATAGATTATAAGGAATTTGCTGCGATGATGAGGATGGGCAATGGAGGGATTGGAAGGCGAACCATGAGGAACACACTAAATTTCAGGGATGCTCTGGGATTGATCGGCACTGGCTCTAGTGACATCATGAATGATTAG | 1500 | 0.4493 | MKKASTATFPSKSLWVLPYRTQSLPDLYTLGRKLGQGQFGTTFLCTEKSTGRTYACKSIPKRKLICQEDYDDVWREIQIMHHLSENPNVVRIHGTYEDLSSVHLVMELCEGGELFDRIVQKGHYSERQAATLIRTIVEVVQACHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAESEIGIFRQILQGKLDFQSEPWPNISESAKDLIRKMLDQNPKKRLTAHEVLSHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIRDLMEAADIDNSGTIDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQQACKDFGLGDAHIDEMIKEIDQDNDGQIDYKEFAAMMRMGNGGIGRRTMRNTLNFRDALGLIGTGSSDIMND | 499 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g1231 | 499 | ProSitePatterns | EF-hand calcium-binding domain. | 342 | 354 | IPR018247 | - | |
| Lele17g1231 | 499 | SMART | serkin_6 | 28 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1231 | 499 | Gene3D | - | 399 | 498 | - | - | |
| Lele17g1231 | 499 | Pfam | Protein kinase domain | 28 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1231 | 499 | CDD | EFh | 406 | 465 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | CDD | STKc_CAMK | 28 | 285 | - | - | |
| Lele17g1231 | 499 | ProSiteProfiles | Protein kinase domain profile. | 28 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele17g1231 | 499 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 401 | 436 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | FunFam | Calcium-dependent protein kinase SK5 | 114 | 298 | - | - | |
| Lele17g1231 | 499 | SUPERFAMILY | EF-hand | 325 | 465 | IPR011992 | - | |
| Lele17g1231 | 499 | ProSitePatterns | EF-hand calcium-binding domain. | 414 | 426 | IPR018247 | - | |
| Lele17g1231 | 499 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 365 | 400 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 437 | 470 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | FunFam | Calcium-dependent protein kinase 1 | 30 | 113 | - | - | |
| Lele17g1231 | 499 | ProSitePatterns | EF-hand calcium-binding domain. | 448 | 460 | IPR018247 | - | |
| Lele17g1231 | 499 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 114 | - | - | |
| Lele17g1231 | 499 | Gene3D | Transferase(Phosphotransferase) domain 1 | 115 | 326 | - | - | |
| Lele17g1231 | 499 | CDD | EFh | 334 | 393 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 305 | IPR011009 | - | |
| Lele17g1231 | 499 | FunFam | Calcium-dependent protein kinase SK5 | 399 | 494 | - | - | |
| Lele17g1231 | 499 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 148 | 160 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele17g1231 | 499 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 23 | 460 | - | - | |
| Lele17g1231 | 499 | ProSitePatterns | Protein kinases ATP-binding region signature. | 34 | 57 | IPR017441 | GO:0005524 | |
| Lele17g1231 | 499 | SMART | efh_1 | 369 | 397 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | SMART | efh_1 | 405 | 433 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | SMART | efh_1 | 333 | 361 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | SMART | efh_1 | 439 | 467 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | Gene3D | - | 327 | 398 | - | - | |
| Lele17g1231 | 499 | FunFam | calcium-dependent protein kinase SK5 | 323 | 395 | - | - | |
| Lele17g1231 | 499 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 329 | 364 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | ProSitePatterns | EF-hand calcium-binding domain. | 378 | 390 | IPR018247 | - | |
| Lele17g1231 | 499 | Pfam | EF-hand domain pair | 334 | 394 | IPR002048 | GO:0005509 | |
| Lele17g1231 | 499 | Pfam | EF-hand domain pair | 404 | 465 | IPR002048 | GO:0005509 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g1231 | Lele-ChrLele17 | 22063110 | 22066468 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g1231 | 16 | 495 | EF-hand Containing Proteins | AT1G35670 | 78.882 | 0.0 | 791 |
Transcription factors information