Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1213 ATGAATTTTTTGAAGAATGGAGTTTGCAGATTGCCTCCCGGATTTAGGTTCCAGCCAACAGATGAAGAACTCGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATGTCCACTTCCTACATCCATCATTCCTGAAGTCAATAATGTCTGCAACTACGATCCTTGGGATTTGCCAGAAACCAGTGCGCCAAACTCAACCCACCTGAGTCATGGGAAGGAGGTAGGAGATTGGGTTCTGTGTCGGATAAGCGTGAAGACGAGAAGAGAAGGTGGTGGTGAGGGAGAGAGAAGATTCTTTGATTTTATGAGTGTACAAAGGGTTGCTGCAGAACCCCATTATTCTGACACGTCATCGTCTTGTTCAAGTTCAAGTGACATTACAAAGGTGTGTTCAGGTGAAGCAGATCATCATGAAGAAACAAGTGGCTATAGCTATACCTTTGACTTTTAA 450 0.4333 MNFLKNGVCRLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEVNNVCNYDPWDLPETSAPNSTHLSHGKEVGDWVLCRISVKTRREGGGEGERRFFDFMSVQRVAAEPHYSDTSSSCSSSSDITKVCSGEADHHEETSGYSYTFDF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1213 149 Gene3D NAC domain 20 70 IPR036093 GO:0003677|GO:0006355
Lele17g1213 149 ProSiteProfiles NAC domain profile. 11 149 IPR003441 GO:0003677|GO:0006355
Lele17g1213 149 PANTHER NAC TRANSCRIPTION FACTOR 56 11 58 - -
Lele17g1213 149 SUPERFAMILY NAC domain 8 97 IPR036093 GO:0003677|GO:0006355
Lele17g1213 149 Pfam No apical meristem (NAM) protein 12 62 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1213 Lele-ChrLele17 21979781 21980698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1213 1 58 NAC Transcription Factor Family AT5G13180 72.414 7.66e-23 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele17g1213 NAM 2.7e-13 No_clan