Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1210 ATGGGTTGCGTGCTCGGAGCGGCGAGGGACGATGCAGGCCGAAGGGCGTGCTCCGGAGCTCAGAACTGTCGTGAGCGAAACTCTGCTGCTGACGGGGGTAATGCTGTTACGGTTGGAAACGGAGGGAAGGCCAAGGAGAAGCAAAGGACTATGCAGCATGGCGGCGAATTTGTTTATAATCTCCCGGGACCGGAACGCCGTAAACCTAGTCTTGGTCCATACGCTCAAACCCAACAGGGGTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCAATCCGAGATTGGACTCCTCGGCGCGCCAACACGTTCGAGAAACTTGCGAAGATTGGACAGGGGACGTATAGCAATGTATATAAAGCAAGAGACCTTGTTACCGGAAAGATAGTAGCTTTAAAGAAAGTTAGGTTTGATAATCTGGAGACAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCAAACATCGTGAAACTCGAGGGCTTGGTTACTTCTAGAATGTCATGTAGCCTTTACTTAATATTCGAGTACATGGAACATGATCTTGCTGGGCTTGCTGCTGGGCAAGGTGTTAAGTTCACTGAGCCTCAAGTGAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCAAAGGTGTCTTGCATCGTGATATCAAGGGCTCCAATCTGCTAATTGATGATGAAGGAATCCTTAAAATTGCTGATTTTGGACTGGCAACTTTCTATGATCCTGAGCACAAGCAGCCCTTGACAAGTAGAGTTGTCACACTTTGGTATCGTGCTCCTGAGCTTCTTCTTGGGGCTACATGCTATGGTGTTGGTATTGACCTCTGGAGTGCTGGCTGCATCATGGGAGAGCTGCTTACGGGGAAGCCAATCATGCCTGGCCGAACAGAGATTGAACAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCTGGTGATTACTGGAAGAAATATAAATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCATATAAACGCTGCATTTTAGAAACCTTCAAGGAATTCTCTCCTCCTTCCGTACATCTAATATGTACTCTTCTTTCAATAGATCCTGTTGATCGTGGCACTGCCTTGGCTGCTCTAAATAGTGATTTTTTTACCACTGAACCTTATGCTTGTGAACCATCAAGTTTGCCAAAGTATCCTCCCAGCAAAGAACTGGATATAAAACTGAGAGATAAAGCGAGAAGGCAAAAAGCTCAAAATGGGAAAACTAATGCAGTTGATGGCACCAAAAGAGTCAGAATACGTGAGCGTGGTCGGGCCATTCCTGCCCCAGAAGCCAATGCTGAGATCCAATCGAACTTAGATAGGTGGAGAGTGGTGGCACATGCAAAGACAAAAAGCAAGAGTGAGAAATTCCCTCCGCCTCATCGAGACGGCGCTGTTGGATATCCATTGGATGCATCTCAGAAGGGACCTGTTTCATTTGGGGCCACTGATGCTTCCTTTGACTCCACAATATTTAATTCAAAACCTGAAGGATCTGATGCAAGCCATGCTGCTTCAGGACCTTACAGAGGTAAGAAAACAAAGAAAACAGATTCATCATGGAAATTCAGGCGTCCATTCAAGTAA 1644 0.4653 MGCVLGAARDDAGRRACSGAQNCRERNSAADGGNAVTVGNGGKAKEKQRTMQHGGEFVYNLPGPERRKPSLGPYAQTQQGWPSWLMAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLETESVKFMAREILVLRRLDHPNIVKLEGLVTSRMSCSLYLIFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSKGVLHRDIKGSNLLIDDEGILKIADFGLATFYDPEHKQPLTSRVVTLWYRAPELLLGATCYGVGIDLWSAGCIMGELLTGKPIMPGRTEIEQLHKIFKLCGSPSGDYWKKYKLPNATLFKPQQPYKRCILETFKEFSPPSVHLICTLLSIDPVDRGTALAALNSDFFTTEPYACEPSSLPKYPPSKELDIKLRDKARRQKAQNGKTNAVDGTKRVRIRERGRAIPAPEANAEIQSNLDRWRVVAHAKTKSKSEKFPPPHRDGAVGYPLDASQKGPVSFGATDASFDSTIFNSKPEGSDASHAASGPYRGKKTKKTDSSWKFRRPFK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1210 547 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Lele17g1210 547 MobiDBLite consensus disorder prediction 24 50 - -
Lele17g1210 547 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1210 547 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Lele17g1210 547 MobiDBLite consensus disorder prediction 500 547 - -
Lele17g1210 547 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Lele17g1210 547 MobiDBLite consensus disorder prediction 500 519 - -
Lele17g1210 547 CDD STKc_CDK9_like 104 388 - -
Lele17g1210 547 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Lele17g1210 547 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Lele17g1210 547 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Lele17g1210 547 MobiDBLite consensus disorder prediction 530 547 - -
Lele17g1210 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lele17g1210 547 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1210 547 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Lele17g1210 547 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1210 Lele-ChrLele17 21969349 21973276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1210 96 426 Core Cell Cycle Gene Families AT5G10270 50.144 1.63e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele17g1210 Pkinase 2e-67 CL0016