Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1208 ATGGATGATGGCCACCCGCGTGAAAATGGCAGACAGAAGGTGGATTGCTATAGAGGAGCTCATTCCCTGTGGAATATGGCTCCCCCGCATCAGGTAAAGGAACCAAATGCCCTGGTTTTGAATAAGAAAATTATGTCTGTTATTGCTGAGAGAGAAGCTGCAATTCGAGAACAGAATGCGGCTTTATCCGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTTCTACAGAGGGATAATGCCTTGATGGAACGGGATAATGCTCTCGCCGCCCTTCAAATCCAGGATAATGCTACCAACTTCTCATTGGGCTGTGGCACTCAACGTGGATCAAAGCGGATGCATCATTCCTCAAATCACTTCGGTCAAATGGCAGAAGGCGCTTACAGAACAAAGGATTTGGCCACAACCAATGCCTTCCCTGTAACTATTGTAGCTTCTGAAGCGGGCAAGTATAATCAGGCGAATAAGAGAACAAGGGAGAACAAGGCAGATTCTTCTAAGGCATCAAAACCACTAGGAAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCGGGCTTCTTCTGAAGTGACAAAGATCAAATCTGAGTGGGATAAACAGGATGTTGGATTGAATTTGATTCAATTTGATGAAAATACCATGCCAGCCCCTGTTTGCACGTGTACCGGAGTACCACGGCAATGCTACAAATGGGGGAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTGTCCATGTATCCGCTACCTCAGCTTCCGAACAAGCGACGTGCACGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTTAGCAGGGTGGCGGCTCAAGGCCGTGATTTATCCTTACCATTAGATCTCAAGGACTACTGGGCCAGACATGGAACGAATCGCTACATCACGATCAAGTAA 951 0.4732 MDDGHPRENGRQKVDCYRGAHSLWNMAPPHQVKEPNALVLNKKIMSVIAEREAAIREQNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNALAALQIQDNATNFSLGCGTQRGSKRMHHSSNHFGQMAEGAYRTKDLATTNAFPVTIVASEAGKYNQANKRTRENKADSSKASKPLGKGKKVSEDLNRRASSEVTKIKSEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRRARVGGRKMSGSVFTRLLSRVAAQGRDLSLPLDLKDYWARHGTNRYITIK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1208 316 MobiDBLite consensus disorder prediction 162 197 - -
Lele17g1208 316 PANTHER - 1 316 IPR010409 -
Lele17g1208 316 Pfam GAGA binding protein-like family 13 316 IPR010409 -
Lele17g1208 316 SMART GAGA_bind_2 1 316 IPR010409 -
Lele17g1208 316 Coils Coil 59 92 - -
Lele17g1208 316 MobiDBLite consensus disorder prediction 161 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1208 Lele-ChrLele17 21958114 21959150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1208 1 316 BBR or BPC Transcription factor family AT2G21240 57.098 3.00e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele17g1208 GAGA_bind 8.5e-98 No_clan