Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1207 ATGAAAACAACCGACACCTCCGATCCAATCACTCTCTCCGATCAACTTCTTTCCTCTCTTCTCGGCGAAATCCCCACCATTCTTCACTTCAAAGGTAAGTGGTCCCTCATCACTTCAAAACTCCACCTTCTTCACTCTCGACTTGCCGATTTCTCCTCCCACTTCCCTTTCTCCTCCTCCTCCAACTCTCTCTCCAGAGACCTTCTTCTCTCCGTAGCCCAGACGCTCAATGACGCCGTTTCTCTCGTCAAGGATTGCCATTCCCCCACCTTGTCCCACGGCAAGCTCAAGACCCAGAGCCTCGTTGATTCACTCCTTGCCAGCCTCGATCACCATCTCTCAGACTGCGATGTTCTCTTCAAAAGCGGCGTCCTCCAGGACGACCTAGTTTCAACTGCGTCTAAAAGGGACGCTGTTCGATTTGAATCCAGGAATTTGACCGCTCGTTTGCAAATTGGGTCCTCTGATTCTAGGATTCTCGCGATGGACTCCTTTCTGGGTTTACTGCAAGAGGATGATAAGAATGTGATGATAGCTGCGGCACAGGGTGTGGTTCCCGTGCTCGTTCGCTTACTGGATTCGAGCTCTTCGGAAATGAAAGAGAAGATCGTCGCTGCGATATCCAGAGTTTCAACGGTGGATGGCAGCAAGCATACATTAATAGCCGAAGGTTTGGTGCTTTTGAATCATCTGCTTCGAGCTCTTGACCATGGAAGTGGGTTTGCTAAAGAGAAAGCTTGTATTGCCCTCCAAGCTCTAACTTTCTCTAAGGAGAACGCGAGGGTAATCGGGTCTAGAGGTGGGATTTCTCCTCTGCTGGACATTTGCCAAGTAGGCACGCCTGTTTCCCAAGCTTCCGCAGCTGGAGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCAGACAAAATTTCGTCGAGGAAAATGCGGTTGTTGTTCTGTTAGGGCTAGCTTCTTCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAATCTAATTTCTGATGACGAAAGCTTGAAATTAATGAGCGTTAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCAGTTCCGTCCGTTCAGAGTCTTGAAGTAGCAATTCAGTTATTGAGAAGCCTTGCTTCGAGTCCACCGATTGCTGAAGTTCTTATTTCAGATGGTGGGTTTATTCAGAGACTTGTGGGCGTGTTACATTGTGGTGTACTGAAATTGAGAATTGCAGCCGCTCGAGCTGTTTATGCTCTTGGGTACAGCACCACAAAGGCGAAGAAAGAGATGGGCGAATGTGGATGCATTACTCCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCCGCAATGGCTTTATCAATACTCTTGTTATATACAGGCAATAGAGGGATTTTCCGGAAGGATGAGAGGGGTATAGTGAGTGCGGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCAGTTTCCATTCTGGTCTCACTTGTGCATTCTAAGACTTGTAGAAAACAAATTGCAGCAGCTGGTGCTAGTGTACATACAAGAAAACTTGTAGAGACGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGCCGTGCAAAGATATGGGAAGCATTTACAAGATCCTTGGGATGA 1671 0.4668 MKTTDTSDPITLSDQLLSSLLGEIPTILHFKGKWSLITSKLHLLHSRLADFSSHFPFSSSSNSLSRDLLLSVAQTLNDAVSLVKDCHSPTLSHGKLKTQSLVDSLLASLDHHLSDCDVLFKSGVLQDDLVSTASKRDAVRFESRNLTARLQIGSSDSRILAMDSFLGLLQEDDKNVMIAAAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDGSKHTLIAEGLVLLNHLLRALDHGSGFAKEKACIALQALTFSKENARVIGSRGGISPLLDICQVGTPVSQASAAGVLRNLAVFPEVRQNFVEENAVVVLLGLASSGTAIAQENAIGCLSNLISDDESLKLMSVKEGGIECLKNFWDSVPSVQSLEVAIQLLRSLASSPPIAEVLISDGGFIQRLVGVLHCGVLKLRIAAARAVYALGYSTTKAKKEMGECGCITPLIQMLDGKAVEEKEAAAMALSILLLYTGNRGIFRKDERGIVSAVQLLDPSIQNLDKKYPVSILVSLVHSKTCRKQIAAAGASVHTRKLVETNVEGSKKLLDSLGRAKIWEAFTRSLG 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1207 556 SUPERFAMILY ARM repeat 146 492 IPR016024 -
Lele17g1207 556 Pfam Armadillo/beta-catenin-like repeat 173 209 IPR000225 GO:0005515
Lele17g1207 556 Gene3D - 362 532 IPR011989 -
Lele17g1207 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 225 IPR000225 GO:0005515
Lele17g1207 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 552 - -
Lele17g1207 556 Gene3D - 135 361 IPR011989 -
Lele17g1207 556 SMART arm_5 256 296 IPR000225 GO:0005515
Lele17g1207 556 SMART arm_5 338 380 IPR000225 GO:0005515
Lele17g1207 556 SMART arm_5 381 422 IPR000225 GO:0005515
Lele17g1207 556 SMART arm_5 297 337 IPR000225 GO:0005515
Lele17g1207 556 SMART arm_5 172 212 IPR000225 GO:0005515
Lele17g1207 556 SMART arm_5 424 464 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1207 Lele-ChrLele17 21951805 21953475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1207 131 355 U-box Gene Family AT2G23140 29.515 1.69e-15 77.8