Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1205 ATGACCAGCGAGGGTGTGACTGATCCTTCCCTCTTAGTTCTGTCACAGACCCACTTTTCATCACCACTCTCCTTCCTTCCCTTTCTTTCTTTCCATCACTGTCTTAATAACTTCCATTTTCAAATCCTCCAACCTCTGTCCATGGCAGCTTTTTCATTCCAGTACCACCCTTTCCTTGTTGACTCTCCATTTTTCTCTAGTGCTCCCCTTAAGATGACAGCTTTCACTGATCAGCCTCAAGTTCATACAAATCCTGCTCCTCAGTTTCACGAGACATCTTTAGAGAATTGCTTCGATGATCAAACCTCCAAGTTCAACATGAGTGATAATGAGCCTTCCTCTGGAAGCAAAAACCAGAGCCCGGAGACCTCTGTGGTATTGGATAAGCTTGAACCTGGTGAGCAGGTCACTCAGAAGGTGACTCCCATGGAGAAGAAGAAGAGAAACAGGAATCGTTCTTCCTTGAGTCGTCCTCAATCTAAGGGAGCTACCGGAGAAAGAAACAAGAGACAAAAGAAGAGCAATAATGGTGAAGTGAAGGAAGGAGATAAGCCAAAAGATAAGCCGAAGGATCAGAAGAAGAGTCCTGAAGAACCCCCAACAGGCTATATCCACGTAAGAGCAAGAAGGGGTCAGGCAACCGATAGCCACAGCCTAGCTGAAAGGGCAAGAAGAGAGAAGATAAGTGAGAGGATGAAGATGTTGCAGCGACTTGTGCCAGGTTGTGATAAGGTGACTGGAAAAGCCCTCATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTGGAGTTCTTGTCCATGAAGCTTGCTTCTGTGAATCCCATGTTCTATGACTTCACAATGGACCTTGACTCCCTCATGGTCAGGCCAGAGAAATCAAATTGTGTAGCATCACCACTACCATCTGGGCAACAATGCAGCCTCCACCAGGCCACAACTTTTGCTGATACAACAACCACCGTTACCGCCAGCTTTCCGACTGTTAATGACTATCCGTTGGACACTTCAGCTTCTTTTTTCCTTCCAGGACAGAGGTCTAATTTCTTATCAGAGGACACAGGTAGTCAATTCTGCGACATAGAAGACCCACGCCAAAAGTTTCTTCATCCATATGGGATCAACAACAACAGCTTATGTTTCTTTCATTAA 1161 0.4505 MTSEGVTDPSLLVLSQTHFSSPLSFLPFLSFHHCLNNFHFQILQPLSMAAFSFQYHPFLVDSPFFSSAPLKMTAFTDQPQVHTNPAPQFHETSLENCFDDQTSKFNMSDNEPSSGSKNQSPETSVVLDKLEPGEQVTQKVTPMEKKKRNRNRSSLSRPQSKGATGERNKRQKKSNNGEVKEGDKPKDKPKDQKKSPEEPPTGYIHVRARRGQATDSHSLAERARREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFTMDLDSLMVRPEKSNCVASPLPSGQQCSLHQATTFADTTTTVTASFPTVNDYPLDTSASFFLPGQRSNFLSEDTGSQFCDIEDPRQKFLHPYGINNNSLCFFH 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1205 386 MobiDBLite consensus disorder prediction 101 125 - -
Lele17g1205 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 279 IPR036638 GO:0046983
Lele17g1205 386 Gene3D - 209 281 IPR036638 GO:0046983
Lele17g1205 386 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 91 313 IPR024097 GO:0006355
Lele17g1205 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 262 IPR011598 GO:0046983
Lele17g1205 386 MobiDBLite consensus disorder prediction 101 224 - -
Lele17g1205 386 CDD bHLH_AtBPE_like 202 287 - -
Lele17g1205 386 SMART finulus 218 268 IPR011598 GO:0046983
Lele17g1205 386 MobiDBLite consensus disorder prediction 163 224 - -
Lele17g1205 386 Pfam Helix-loop-helix DNA-binding domain 216 263 IPR011598 GO:0046983
Lele17g1205 386 FunFam Basic helix-loop-helix transcription factor 209 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1205 Lele-ChrLele17 21935072 21937933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1205 48 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 42.466 1.59e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g1205 HLH 1.2e-06 No_clan