Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1201 ATGCACTTCATAACATGGAACACCATAGCTATGGCTCTGGTGTTGCTTCACTTGAGCTTAATTATGCCTGTTTTCTCTCTCTCGTATCACCCAGATAAGATCCTACGGCTTCCTGGACAACCCCACGTACGTTTCCAACACTATTCAGGATATGTCACAGTCGATGACGAGAAACATAAAGCCTTGTTCTACTATTTTGTTGAATCTGAAACTGATCCTGCTTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCACTTGGGGTTGGAGCATTCTCTGAAAATGGACCCTTTAAACCAAATGGTGAAGTTTTAATTCAAAATGATTACAGCTGGAACAAAGAGGCAAACATGCTATATTTGGAGACACCAATTGGGGTGGGATTTTCTTATGCTAAAGACGGATCTTATATGACAGTGGACGATAAGGAAACTGCCAGGGACAATCTCATGTTTCTGAAACTCTGGTTCAACAAGTTCCCTCAATACAGGCAAAGAGATTTGTATCTTACTGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAACGCTCATGATTGACCTCAACAAGAAGGAAAAGATATTCAATCTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATACGCCACAGATTTCAACTCAAGAGCCGAGTTCTTCTGGTCTCATGGATTAATATCAGATTCAACGTACAAACTGTTCACATCAGTGTGTAATTATTCTCGGTACGTTAGTGAGTACTACAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGAGCCAAGTAAGCACAGAAACCAGTAAATTCGTCGACAAGTACGATGTAACCCTTGATGTCTGCATTTCCTCAGTTCTTTCACAGTCCAAGGCCATTTGTCCTCAAACGCAACAAAAAGGTGAGAGGCTAGACGTATGCGTTGATGATAAAGTTATAAATTACTTGAACCGAAGAGATGTTCAGGGGGCACTTCATGCCAAACTTGTTGGAGTTCGAAAGTGGGATGTCTGCAGCAACATCCTGGACTACGATATGCTCAATCTTGAAGTACCTACACTTCCTATTGTTGGGTCAATTGTCAAAGCTGGAGTTCATGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGTAGCCGTACCTTGGTTCAGAAACTAGCAAGGCAATTAGCTCTGAACACTACTGTTCCTTACAGAGTATGGTTCGAAGGCCAACAGGTTGGTGGGTGGACTCAAGTTTATGGGAATAATAAGCTGTCATTTGCGACCATAAGAGGTGCTTCCCATGAAGCTCCTTTCTCGCAGCCTGAGAGATCGTTAACGTTGTTCAAGTCATTCTTGCAAGGCAGGCCTCTACCAGCTGATATTTTCTGA 1401 0.424 MHFITWNTIAMALVLLHLSLIMPVFSLSYHPDKILRLPGQPHVRFQHYSGYVTVDDEKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFKPNGEVLIQNDYSWNKEANMLYLETPIGVGFSYAKDGSYMTVDDKETARDNLMFLKLWFNKFPQYRQRDLYLTGESYAGHYVPQLATLMIDLNKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTSVCNYSRYVSEYYRDSVSPLCSKVMSQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQQKGERLDVCVDDKVINYLNRRDVQGALHAKLVGVRKWDVCSNILDYDMLNLEVPTLPIVGSIVKAGVHVLIYSGDQDSVIPLTGSRTLVQKLARQLALNTTVPYRVWFEGQQVGGWTQVYGNNKLSFATIRGASHEAPFSQPERSLTLFKSFLQGRPLPADIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1201 466 FunFam Carboxypeptidase 358 458 - -
Lele17g1201 466 Gene3D - 358 458 - -
Lele17g1201 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Lele17g1201 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 Gene3D alpha/beta hydrolase 29 289 IPR029058 -
Lele17g1201 466 FunFam Carboxypeptidase 28 462 - -
Lele17g1201 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 445 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 Gene3D - 312 348 - -
Lele17g1201 466 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Lele17g1201 466 Pfam Serine carboxypeptidase 39 458 IPR001563 GO:0004185|GO:0006508
Lele17g1201 466 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1201 Lele-ChrLele17 21904625 21907186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1201 320 461 Calmodulin-binding Proteins AT2G22960 28.169 7.30e-14 68.2