Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1200 ATGTTGGGAGATATCACGCCCGCGTTGCCAGGGCCTGCGATTAGCTTCTCGGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCCCTCCCCACGGCTATTCGAGCCCCCTTGATGATCCTATTCCTGCTTCTAGCGCTGGAGAAGCAAAATGTGATACTCTTCGTGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCAATGCTGGATGTTGAATCAAGCTCCTTTTCCTGGGATGCGCTATCTTCAGTGCATCATGTTGAATACGGCAGCAGCAATGACCATTCTGAGGAGGACATTAACAAACCTCTTGAGGTTCGTCATCTTCTATACTGGTTTTGTATGCAAGACTACATACATAGGCCAAAATGTGTGCTGCATATGGATCTCCTTTTCCAACCTTTCTATCAGGTAACTGTACATTCTATCTTCTTTGCTTTTTTCCGTCGCTTTGGGAATGATGATGCTTTTCCAAATGAGGAAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCGACACAATCTGAACGTCTTGGTTATGAATTTGCCAAGTGCTTGGGAGTCCGAACTCCACAGGCTAGAGTAATTCATAATACCAGTCCTGAATGGCTCCAAATAAAGGATGCAGCAGAAAAAGCAAGAGATGCGGCTAATTCTGAAGGAGATGAAACTAGTAACATGACATGTTCAGAACTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGGTATGATCCAAATCTGGGTTTGAATTACAATTCGGTCTTGTTATGTAACCATGTAAATAATTTTGCTTGCTTTGTGGACATTAGTGTACAGGACTACACCTGTAATGTGAAAAGAAACTGTTTTGTTGATAGGATGTTTATAAGTTACGTACATGGGTCACCTTTACTTGAAAGTTCTAGTGCTTTCGAGTCCCAGGAATCAGTAGAAAGAACGTCAGCAGCTCTTGGCAAGGTATTGATGCTAGACCTTGTCATCCGAAATGAAGATAGACTACCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCGAATTTGTTGTTGACTGAAAAGTTTATCCCTGCAAATGTTGATACACTAGAGGAAGCTTTTGATTCTGCAAAGCATCTTTATAGACCGAGGGATATCAGGGCATTTCAAAAAGAAAGATGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCGGGATTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAACATTGTCTAACATGAGCCTTCAAAGCCTCACATCAAGTGAAGCACCCTTTACTGACTTCAACATTGTGGCTATTGACTCTGGTGTTCCCCGCCGACCCTCTGCTGGTAGACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTACTCAATAGTTCTGAGTTTGCCTCCAATCTCTTACATGATATAACTGGAGGTAGATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGTCATCAGCAGTTCATGCATTCCGTAGTGGTTTTCGTGCTTCTCTTAGGAATCTGCAGGGATTCCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTTGTTAAGATCATTTATGAACATTATGAGCAAATTATCAATGGGGGAATTTGACAAAGAGGATTCACTGGTTTCGCCTGACACCACTTCACAGGCAGCTGGAGGTGGCTACTGTTCCTCTCCAACAAGTAGAGAGAGTAGAGATAGTTCTGAATTTTCTGCTATGACGAGAGAAGGTTGGCAGGGGAAGTTCTCTAAAGGAAGCGTGGAACCACTTCAAAGTCTCCGCTTGACAGCAAAGTTTCGTGACTTCCATAAGTTTGCAAAGGTCGATGCAGAGTCTAACAAAGAATTGGAACAGTGGAATGAAATGCTAAAAACTGATGCTGTCAAGCTGTGCCAGTTAAACAATTTCAATACAGGATTTTTTGAGGGTAGTGATAATCACTGTGCCATTGATGCTTATGAGCTGAAGGTCAGACTTGAGCATATTCTTGAGAGAATTACATTGATATCCGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTCACAAATAATCTTTTCATTGGTGGAGCACTGGCTGCAAGATCTTTGTACACACTTCAACAATTGGGAATCGCACATATTATGTGTTTGTGTGCGAACGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTTGTATGCGACGACGAAGATTCTAACATTAGTAGCATATTCGAAGAAGCTTGTAATCTAATAAGTGATGTTGAAGAAACAGGTCAGAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAATACACCTTACTTGAAGCATGGAATGCGATGAAACGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAAGATCTTAATGGAACTGGATCAGAAACTGCATGGAAAAGTGTCCATGGTGTGGCATCAAAGGAAACCGATGATGAAAATTTGCCCAATATGTGGAAAGAATATAGGACTAAGCAGCAGCTCTCTGAAGCTGCATCTGCAGAAATCGCATAGAAGACTATTATCAGGAAGTGTAGATAGTGGCATGAAAATGGAGATTGAGATAGCTTTAGCAGCTTTGAAGATTAGTCGCGGTGGAAGCTTCAGCCCTACACAAAGGCAGTCTCATTCAATCACGGATGAATAG 2820 0.4216 MLGDITPALPGPAISFSEWLDLVRKRTAMYRSSGPPHGYSSPLDDPIPASSAGEAKCDTLREETTEINLSERLGKAAMLDVESSSFSWDALSSVHHVEYGSSNDHSEEDINKPLEVRHLLYWFCMQDYIHRPKCVLHMDLLFQPFYQVTVHSIFFAFFRRFGNDDAFPNEEAAVIKISSTRMATQSERLGYEFAKCLGVRTPQARVIHNTSPEWLQIKDAAEKARDAANSEGDETSNMTCSELLEALELSRCLFFMGYDPNLGLNYNSVLLCNHVNNFACFVDISVQDYTCNVKRNCFVDRMFISYVHGSPLLESSSAFESQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKFIPANVDTLEEAFDSAKHLYRPRDIRAFQKERWSTSSDSRLSSHNPGLVSQVSDISEMAESPTLSNMSLQSLTSSEAPFTDFNIVAIDSGVPRRPSAGRRAIDQAIYPKLVELVLNSSEFASNLLHDITGGRLGSPLPEVPNSTTDVHSNDMSSAVHAFRSGFRASLRNLQGFHIFLLTLHQKLDSLLRSFMNIMSKLSMGEFDKEDSLVSPDTTSQAAGGGYCSSPTSRESRDSSEFSAMTREGWQGKFSKGSVEPLQSLRLTAKFRDFHKFAKVDAESNKELEQWNEMLKTDAVKLCQLNNFNTGFFEGSDNHCAIDAYELKVRLEHILERITLISEAANSEKPSRVTNNLFIGGALAARSLYTLQQLGIAHIMCLCANEIGQSDSQFPDLFAYKNFFVCDDEDSNISSIFEEACNLISDVEETGQRILVHCFEGKSRSVTLVLAYLMLRKKYTLLEAWNAMKRVHRRAQPNDGFAKILMELDQKLHGKVSMVWHQRKPMMKICPICGKNIGLSSSSLKLHLQKSHRRLLSGSVDSGMKMEIEIALAALKISRGGSFSPTQRQSHSITDE 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1200 939 SUPERFAMILY Protein kinase-like (PK-like) 19 265 IPR011009 -
Lele17g1200 939 CDD DSP 713 850 - -
Lele17g1200 939 Gene3D - 311 446 IPR036940 GO:0016301
Lele17g1200 939 SMART dsp_5 712 854 IPR020422 GO:0006470|GO:0008138
Lele17g1200 939 Pfam Dual specificity phosphatase, catalytic domain 724 853 IPR000340 GO:0008138|GO:0016311
Lele17g1200 939 MobiDBLite consensus disorder prediction 577 605 - -
Lele17g1200 939 MobiDBLite consensus disorder prediction 33 54 - -
Lele17g1200 939 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 712 857 IPR029021 -
Lele17g1200 939 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 777 833 IPR000387 GO:0016311|GO:0016791
Lele17g1200 939 ProSiteProfiles Dual specificity protein phosphatase domain profile. 712 857 IPR020422 GO:0006470|GO:0008138
Lele17g1200 939 Gene3D Protein tyrosine phosphatase superfamily 688 858 IPR029021 -
Lele17g1200 939 FunFam Dual specificity protein phosphatase PHS1 684 858 - -
Lele17g1200 939 SUPERFAMILY Protein kinase-like (PK-like) 302 472 IPR011009 -
Lele17g1200 939 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 592 938 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lele17g1200 939 Pfam Actin-fragmin kinase, catalytic 66 263 IPR015275 -
Lele17g1200 939 Pfam Actin-fragmin kinase, catalytic 278 458 IPR015275 -
Lele17g1200 939 MobiDBLite consensus disorder prediction 573 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1200 Lele-ChrLele17 21895547 21901016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1200 1 923 Protein tyrosine phosphatase (PTP) family AT5G23720 55.521 0.0 954