Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g1197 | ATGGGCTCATCAGAGGTATCGATCAAGGGAAATCGCATGGACGGGACTGGGGGAAGCCACTCCTCTGTTTACAACAACCATAAAGATGCTTGGAATGCAGCAGAGTGTCAGAATGCTCACTCATCATCAACTGTGAGAGACCCTGAAGCAGCGCTGTACAAGGAGCTATGGCATGCTTGTGCTGGTCCTCTCGTTACAGTGCCCCGTGAAGGGGAACGGGTCTTCTATTTTCCTCAGGGACATATTGAGCAAATGGAGGCGTCCACAAATCAGGTGGCGGACCAGCAGATACCTGTGTACGATCTCCCATCGAAAATCCTTTGTCGAGTGATCAACGTGCTGTTGAAGGCTGAGCCGGACACCGATGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAGCCAAATCAAGATGAAAACGACGTGGAGAATGAGGCTCCGCCTCCTCCACCGCCACGATTTCACGTGCATTCGTTCTGTAAAACTCTGACGGCCTCTGATACGAGTACTCATGGTGGATTTTCAGTACTGAGACGTCATGCCGATGAATGCCTTCCTCCGCTGGATATGTCGAAGCAGCCACCTAACCAGGAGTTGGTGGCGAAGGATCTACACGGTAACGAGTGGAGATTCAGGCATATCTTTAGAGGTCAACCACGTAGACATCTACTGCAAAGTGGTTGGAGTGTTTTTGTCAGCTCTAAGAGGCTTGTTGCTGGTGATGCATTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGTGTTGGTGTAAGGCGTGCAATGAGACAGCAGGGTAATGTTCCGTCCTCAGTGATCTCTTGTCATAGCATGCATCTTGGTGTCCTTGCAACTGCCTGGCATGCGGTTTCGACTGGGACCATGTTCACTGTGTATTACAAGCCCAGGACCAGTCCTGCTGAATTTATTGTTCCATATGAACAGTATATGGAGTCTCTAAAAAATAACTATACAATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGTCTCCAGAGCAGAGGTTTACTGGTACTGTTATTGGACTTGAAGATGCTGATACACAAAGATGGCCGAAATCCAAATGGAGATGCCTCAAGGTGCGATGGGATGAAACGTCTGGCGTTCCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAACCTGCTCATGCTCCTCCAGCTCTAAATCCTCTTACAATGGTCAGGCCTAAAAGGCCCCGGTGTAATGCGGTTCCATCATCACCTGATTCCTCTGTTCTCACTCGTGAAGTGTCATCTAAGGTAAGTATAGACCCTTTGCCAGCAAGTGGATTTCCAAGGGTATTGCAAAGTCAAGAATTCCCGACCTTGAGAGGCAGTTTGGCGGAAAGCTATGAATCTGATACTGCTGAAAAGCCTGATGAAAGAAATGATGCAGGGTCTACTTCAAGTACGTTTGCTCCAGAGAGCTGGACAGCAATGGGGAGGCATGAGCCTACATATTCAGATTTGCTTTCAAGCTTTGGGACATGTGGAGATCGAACCCATTTATCCTTGGTACATCAAACTAGCCCTGTGGCTAGTCCTGGAAGAAAACATGTGTTAGGTCATGAAGGCAAGTTTAATATGGTAGCCTGCCCAAGGTCTGTAAAGCCTTCTAATCTGTCATTAAACCTCTCGGACCCTAATATGAAAGGTTCTGCACAAGACAGTGATGTAGCTTACCATGCTAGGCGGAATTTGAGGTATGGTGCATTTGGGGATTACCCTGTTCTTCATGGTCACAAAGAAGAGCATAGGCATGGAAGCCTATTGATGCCACCGCCTCCACCCCCAACTCAGCATGATAGTCCTGGATCAAGGGAACCGATGCAAAAACCAATACCAGCAAGATCATATGAGACTGTTAAAGCTAAAGAAGGGGATTGTAAGCTGTTTGGCATCTCACTTATCAGTAGCCCAACTACACCAGAGCCTTCCACATCAAAATTAAGTGTGGCGTGTAAGCCAGCTGGTCACAAGCATCTTACATCTCAACGGCCTTATAGTAATGAAAATGATTTGAAATCAGAACAATCAAGCGGATCGAAGCTGCCAGATGCAGTACTTGCTACTGATGACCATGAAAAGCCATCACAAACATTTCTGCCACATATGAAAGGTGTTCAAGCCAAACCACGCAGTGATTCTGTTAGGAGTTGCACTAAAGTTCACAAGAAGGGGATTGCGCTTGGTAGATCAGTTGACCTTACGAAGTTCAGCAACTATGATGAATTAGTTGCTGAATTAGATGAATTGTTTGAGTTTGAAGGGGAATTAAGGTCGTTGAAAAAGGATTGGCTTATTGTCTACACTGATAATGAGGGTGACGTGATGCTTGTTGGGGATGACCCATGGCAGGAGTTCTGTGCCATGGTTCGCAAAATATATATCTACCCTAAAGAGGAAATTCAGAAGATGAGCCCTGGAACAATAAAGTCTGGGGTTGAAGAGAGTCTGTCGGTTAGTGAAGGCGTGGATGCTAAAGAAATCCGCTCTAGAGAAGCAGGAGATTCTATAAGGCCTTCCAGTTGGGAACTACGACGAAGACGAACTGTGATTCCTAAACGAAGACAATTGTGA | 2601 | 0.4656 | MGSSEVSIKGNRMDGTGGSHSSVYNNHKDAWNAAECQNAHSSSTVRDPEAALYKELWHACAGPLVTVPREGERVFYFPQGHIEQMEASTNQVADQQIPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLLPEPNQDENDVENEAPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPNQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISCHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEESPEQRFTGTVIGLEDADTQRWPKSKWRCLKVRWDETSGVPRPERVSPWKIEPAHAPPALNPLTMVRPKRPRCNAVPSSPDSSVLTREVSSKVSIDPLPASGFPRVLQSQEFPTLRGSLAESYESDTAEKPDERNDAGSTSSTFAPESWTAMGRHEPTYSDLLSSFGTCGDRTHLSLVHQTSPVASPGRKHVLGHEGKFNMVACPRSVKPSNLSLNLSDPNMKGSAQDSDVAYHARRNLRYGAFGDYPVLHGHKEEHRHGSLLMPPPPPPTQHDSPGSREPMQKPIPARSYETVKAKEGDCKLFGISLISSPTTPEPSTSKLSVACKPAGHKHLTSQRPYSNENDLKSEQSSGSKLPDAVLATDDHEKPSQTFLPHMKGVQAKPRSDSVRSCTKVHKKGIALGRSVDLTKFSNYDELVAELDELFEFEGELRSLKKDWLIVYTDNEGDVMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTIKSGVEESLSVSEGVDAKEIRSREAGDSIRPSSWELRRRRTVIPKRRQL | 866 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g1197 | 866 | Gene3D | - | 321 | 392 | - | - | |
| Lele17g1197 | 866 | MobiDBLite | consensus disorder prediction | 457 | 482 | - | - | |
| Lele17g1197 | 866 | MobiDBLite | consensus disorder prediction | 388 | 423 | - | - | |
| Lele17g1197 | 866 | Pfam | Auxin response factor | 284 | 366 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
| Lele17g1197 | 866 | Gene3D | - | 720 | 814 | - | - | |
| Lele17g1197 | 866 | FunFam | Auxin response factor | 156 | 260 | - | - | |
| Lele17g1197 | 866 | ProSiteProfiles | PB1 domain profile. | 725 | 807 | IPR000270 | GO:0005515 | |
| Lele17g1197 | 866 | MobiDBLite | consensus disorder prediction | 645 | 691 | - | - | |
| Lele17g1197 | 866 | ProSiteProfiles | B3 DNA-binding domain profile. | 158 | 260 | IPR003340 | GO:0003677 | |
| Lele17g1197 | 866 | SUPERFAMILY | CAD & PB1 domains | 727 | 802 | - | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information