Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1197 ATGGGCTCATCAGAGGTATCGATCAAGGGAAATCGCATGGACGGGACTGGGGGAAGCCACTCCTCTGTTTACAACAACCATAAAGATGCTTGGAATGCAGCAGAGTGTCAGAATGCTCACTCATCATCAACTGTGAGAGACCCTGAAGCAGCGCTGTACAAGGAGCTATGGCATGCTTGTGCTGGTCCTCTCGTTACAGTGCCCCGTGAAGGGGAACGGGTCTTCTATTTTCCTCAGGGACATATTGAGCAAATGGAGGCGTCCACAAATCAGGTGGCGGACCAGCAGATACCTGTGTACGATCTCCCATCGAAAATCCTTTGTCGAGTGATCAACGTGCTGTTGAAGGCTGAGCCGGACACCGATGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAGCCAAATCAAGATGAAAACGACGTGGAGAATGAGGCTCCGCCTCCTCCACCGCCACGATTTCACGTGCATTCGTTCTGTAAAACTCTGACGGCCTCTGATACGAGTACTCATGGTGGATTTTCAGTACTGAGACGTCATGCCGATGAATGCCTTCCTCCGCTGGATATGTCGAAGCAGCCACCTAACCAGGAGTTGGTGGCGAAGGATCTACACGGTAACGAGTGGAGATTCAGGCATATCTTTAGAGGTCAACCACGTAGACATCTACTGCAAAGTGGTTGGAGTGTTTTTGTCAGCTCTAAGAGGCTTGTTGCTGGTGATGCATTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGTGTTGGTGTAAGGCGTGCAATGAGACAGCAGGGTAATGTTCCGTCCTCAGTGATCTCTTGTCATAGCATGCATCTTGGTGTCCTTGCAACTGCCTGGCATGCGGTTTCGACTGGGACCATGTTCACTGTGTATTACAAGCCCAGGACCAGTCCTGCTGAATTTATTGTTCCATATGAACAGTATATGGAGTCTCTAAAAAATAACTATACAATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGTCTCCAGAGCAGAGGTTTACTGGTACTGTTATTGGACTTGAAGATGCTGATACACAAAGATGGCCGAAATCCAAATGGAGATGCCTCAAGGTGCGATGGGATGAAACGTCTGGCGTTCCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAACCTGCTCATGCTCCTCCAGCTCTAAATCCTCTTACAATGGTCAGGCCTAAAAGGCCCCGGTGTAATGCGGTTCCATCATCACCTGATTCCTCTGTTCTCACTCGTGAAGTGTCATCTAAGGTAAGTATAGACCCTTTGCCAGCAAGTGGATTTCCAAGGGTATTGCAAAGTCAAGAATTCCCGACCTTGAGAGGCAGTTTGGCGGAAAGCTATGAATCTGATACTGCTGAAAAGCCTGATGAAAGAAATGATGCAGGGTCTACTTCAAGTACGTTTGCTCCAGAGAGCTGGACAGCAATGGGGAGGCATGAGCCTACATATTCAGATTTGCTTTCAAGCTTTGGGACATGTGGAGATCGAACCCATTTATCCTTGGTACATCAAACTAGCCCTGTGGCTAGTCCTGGAAGAAAACATGTGTTAGGTCATGAAGGCAAGTTTAATATGGTAGCCTGCCCAAGGTCTGTAAAGCCTTCTAATCTGTCATTAAACCTCTCGGACCCTAATATGAAAGGTTCTGCACAAGACAGTGATGTAGCTTACCATGCTAGGCGGAATTTGAGGTATGGTGCATTTGGGGATTACCCTGTTCTTCATGGTCACAAAGAAGAGCATAGGCATGGAAGCCTATTGATGCCACCGCCTCCACCCCCAACTCAGCATGATAGTCCTGGATCAAGGGAACCGATGCAAAAACCAATACCAGCAAGATCATATGAGACTGTTAAAGCTAAAGAAGGGGATTGTAAGCTGTTTGGCATCTCACTTATCAGTAGCCCAACTACACCAGAGCCTTCCACATCAAAATTAAGTGTGGCGTGTAAGCCAGCTGGTCACAAGCATCTTACATCTCAACGGCCTTATAGTAATGAAAATGATTTGAAATCAGAACAATCAAGCGGATCGAAGCTGCCAGATGCAGTACTTGCTACTGATGACCATGAAAAGCCATCACAAACATTTCTGCCACATATGAAAGGTGTTCAAGCCAAACCACGCAGTGATTCTGTTAGGAGTTGCACTAAAGTTCACAAGAAGGGGATTGCGCTTGGTAGATCAGTTGACCTTACGAAGTTCAGCAACTATGATGAATTAGTTGCTGAATTAGATGAATTGTTTGAGTTTGAAGGGGAATTAAGGTCGTTGAAAAAGGATTGGCTTATTGTCTACACTGATAATGAGGGTGACGTGATGCTTGTTGGGGATGACCCATGGCAGGAGTTCTGTGCCATGGTTCGCAAAATATATATCTACCCTAAAGAGGAAATTCAGAAGATGAGCCCTGGAACAATAAAGTCTGGGGTTGAAGAGAGTCTGTCGGTTAGTGAAGGCGTGGATGCTAAAGAAATCCGCTCTAGAGAAGCAGGAGATTCTATAAGGCCTTCCAGTTGGGAACTACGACGAAGACGAACTGTGATTCCTAAACGAAGACAATTGTGA 2601 0.4656 MGSSEVSIKGNRMDGTGGSHSSVYNNHKDAWNAAECQNAHSSSTVRDPEAALYKELWHACAGPLVTVPREGERVFYFPQGHIEQMEASTNQVADQQIPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLLPEPNQDENDVENEAPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPNQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISCHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEESPEQRFTGTVIGLEDADTQRWPKSKWRCLKVRWDETSGVPRPERVSPWKIEPAHAPPALNPLTMVRPKRPRCNAVPSSPDSSVLTREVSSKVSIDPLPASGFPRVLQSQEFPTLRGSLAESYESDTAEKPDERNDAGSTSSTFAPESWTAMGRHEPTYSDLLSSFGTCGDRTHLSLVHQTSPVASPGRKHVLGHEGKFNMVACPRSVKPSNLSLNLSDPNMKGSAQDSDVAYHARRNLRYGAFGDYPVLHGHKEEHRHGSLLMPPPPPPTQHDSPGSREPMQKPIPARSYETVKAKEGDCKLFGISLISSPTTPEPSTSKLSVACKPAGHKHLTSQRPYSNENDLKSEQSSGSKLPDAVLATDDHEKPSQTFLPHMKGVQAKPRSDSVRSCTKVHKKGIALGRSVDLTKFSNYDELVAELDELFEFEGELRSLKKDWLIVYTDNEGDVMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTIKSGVEESLSVSEGVDAKEIRSREAGDSIRPSSWELRRRRTVIPKRRQL 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1197 866 Gene3D - 321 392 - -
Lele17g1197 866 MobiDBLite consensus disorder prediction 457 482 - -
Lele17g1197 866 MobiDBLite consensus disorder prediction 388 423 - -
Lele17g1197 866 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele17g1197 866 Gene3D - 720 814 - -
Lele17g1197 866 FunFam Auxin response factor 156 260 - -
Lele17g1197 866 ProSiteProfiles PB1 domain profile. 725 807 IPR000270 GO:0005515
Lele17g1197 866 MobiDBLite consensus disorder prediction 645 691 - -
Lele17g1197 866 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Lele17g1197 866 SUPERFAMILY CAD & PB1 domains 727 802 - -
Lele17g1197 866 MobiDBLite consensus disorder prediction 590 619 - -
Lele17g1197 866 CDD B3_DNA 156 258 IPR003340 GO:0003677
Lele17g1197 866 FunFam Auxin response factor 720 814 - -
Lele17g1197 866 Pfam AUX/IAA family 723 812 IPR033389 -
Lele17g1197 866 SUPERFAMILY DNA-binding pseudobarrel domain 154 287 IPR015300 -
Lele17g1197 866 MobiDBLite consensus disorder prediction 670 691 - -
Lele17g1197 866 MobiDBLite consensus disorder prediction 1 21 - -
Lele17g1197 866 FunFam Auxin response factor 321 393 - -
Lele17g1197 866 Gene3D - 155 260 IPR015300 -
Lele17g1197 866 SMART B3_2 158 260 IPR003340 GO:0003677
Lele17g1197 866 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Lele17g1197 866 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 814 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1197 Lele-ChrLele17 21879276 21883817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1197 1 839 B3 DNA Binding Superfamily AT5G62000 61.521 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele17g1197 B3 2e-21 CL0405