Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1135 ATGGCGAGCAGTAGTGCGGCAGTTAACGTGGAGGATGTTCCCTCTGTGGATCTCATGACTGAGCTTCTCCGTCGACTGAAATGCTCCTCCACACCTGACAAGCGTCTCATCCTCATTGGTCCTCCTGGATCAGGAAAAGGCACCCAATCACCAATAATTAAAGATGAGTATTGCTTGTGCCACTTAGCTACAGGTGATATGTTAAGAGCAGCTGTAACTGCTAAAACCCCTCTGGGCATGAAGGCTAAAGAGGCTATGGATGCAGGACAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATAAAGAAACCATCATGCCAGAAAGGTTTCATTCTTGATGGATTTCCAAGAACTGTCGTCCAGGCAGAGAAGCTTGATGAAATGCTGGAGAAGAAGGGGGTTAAGGTTGATAAAGTGCTGAATTTCGCAATTGATGATGCAATCCTTGAGGAGCGTATTACCGGTCGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAATTTGCTCCTCCCAAGGTTCCTGGGGTTGATGATGTCACTGGTGAGCCTCTAATTCAGCGCAAGGATGATACAGCAGCTGTTCTCAAGTCAAGACTGGAGGCATTTCACAGGCAAACTGAACCGGTGATTGATTATTATTCAAAGAAGGGCGTTGTCGCTAATCTGTCAGCTGAGAAACCTCCGAAAGAGGTGACAGTTGAAGTGGAGAAGGTGCTATCTTCCATTTCACCTTCTTGCTTTCTGAATCCACAGTCTGAAACTGCAAGCCCCACAGTCAACGCCATTTTCATTTCCATGGCGAACCAATCCCAAGCGAAGCCTAACCTCACCGACGTCGACCCTAACTCCGGTTTTTGCCCTTCTACCCGAACATTCCATAGCCTCCGTCCTGACTTCCCCCTTCCCCCTCTCTCTCAACCTCTCTCCATCACCGAATTCGCATTCTCTCTCCTCCCCTCCTCCGCTTCCTCCACCACCGTCCTCATCGACTCCGTCACCGGCCACCAACTGTCCTACTCCCTCTTCCTTCACCAAGTCAAAAACCTCGCTTCCTCCCTCTCTTCCCTCACACCTCTTTCCAAAGGCCAAGTCGCCTTCATTGTCTCCCCTTCTTCCCTGCACATTCCCGTTCTCTATTTCTCTCTCTTATCTCTGGGAATCATCGTCTCACCCGCTAACCCGATCAGCTCTGACTCGGAGGTGGCTCACCAGGTTCGACTCACTCAACCCGTGATCGCATTCGCCACCTCCTCTACTGCCCACAAGATCCCCAACCTTCAATACGGCACCGTATTGCTTGACTCCCCTCAGTTCGCTTCCATGATTAATGGCCTCCCCGGGAATGATAATAACAGAGTTGAGGTGAGTCAATCCGATACGGCGGCGATTCTCTTCTCTTCGGGAACCACAGGCCGAGTCAAGGGAGTTTTGTTGACTCACAGGAATTTTATTCATGTCATCCGTGGCCTTTATCACACGAGGCACCTGAATATGAATGACGAAGAACGCCGTGTGTACTTGTTCCCGTTGCCTCTGTTTCATGTGTTTGGGTTCTTCATGCTGCTTTCGACCGTGGCAACGGGCGACACCATGGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGCTGAAGGTTGTAGAGAGGTACAGGATTACGAGCATGCCGGTGTCGCCGCCACTTGTGGTGGCGCTGACTAAGTCGGAGTTGGTAAGTAAGTACAACCTTAGCTCACTTCGACTTCTGGGGTCCGGCGGCGCTCCGCTTGGCAAGGAGGTTGCAGAAAACTTCAAAGTCAAATTCCCTAACGTGGAAATCGCGGAAGGATATGGTTTGACTGAGAGCTCAGGTTTGGTAACGAGAATGATAGGGCCTGAAGAGACAAAGCGTCACGGTTCAGTGGGTCGACTGCACAATGATTTTGAAGCCAAAATAGTGGATCCTGCATCTGGAAAAGCATTGCCTCCTGGCATGAAAGGAGAACTATGGTTGCGAGGTCCTACAATTATGAAAGGTTATTTAGCAGATGAGAAGGCGACGGCTGAGACATTGGATTCAGAAGGATGGCTCAAGACTGGTGATCTTTGTTACTTTGACTCTCAGGGCTTCCTTTACGTTGTTGACAGGTTAAAGGAGCTCATTAAATACAAAGCATACCAGGTTGCCCCAGCTGAGTTGGAACTTGTACTTCTCTCCAATCCTGAAATTGCTGATGCTGCTGTAATTCCTTACCCGGATGAAGATGCAGGGCAGATACCAATGGCCTTTGTGGTCAGAAAATCTGGGAACAATATTAGTGCATCTGAGGTCATGGATTTTGTGGCAAAGCAGGTGGCACCATACAAGAAAATAAGGCGGCTATCATTTGTGAACAGTATTCCGAAATCTGCATCTGGCAAAATATTGAGAAGAGAATTAGTTACTTATGCTCTCTCTGCTGCTTCCTCCAAATTGTGA 2472 0.4862 MASSSAAVNVEDVPSVDLMTELLRRLKCSSTPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVTAKTPLGMKAKEAMDAGQLVSDDLVVGIIDEAIKKPSCQKGFILDGFPRTVVQAEKLDEMLEKKGVKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGVVANLSAEKPPKEVTVEVEKVLSSISPSCFLNPQSETASPTVNAIFISMANQSQAKPNLTDVDPNSGFCPSTRTFHSLRPDFPLPPLSQPLSITEFAFSLLPSSASSTTVLIDSVTGHQLSYSLFLHQVKNLASSLSSLTPLSKGQVAFIVSPSSLHIPVLYFSLLSLGIIVSPANPISSDSEVAHQVRLTQPVIAFATSSTAHKIPNLQYGTVLLDSPQFASMINGLPGNDNNRVEVSQSDTAAILFSSGTTGRVKGVLLTHRNFIHVIRGLYHTRHLNMNDEERRVYLFPLPLFHVFGFFMLLSTVATGDTMVLMQRFDFEGMLKVVERYRITSMPVSPPLVVALTKSELVSKYNLSSLRLLGSGGAPLGKEVAENFKVKFPNVEIAEGYGLTESSGLVTRMIGPEETKRHGSVGRLHNDFEAKIVDPASGKALPPGMKGELWLRGPTIMKGYLADEKATAETLDSEGWLKTGDLCYFDSQGFLYVVDRLKELIKYKAYQVAPAELELVLLSNPEIADAAVIPYPDEDAGQIPMAFVVRKSGNNISASEVMDFVAKQVAPYKKIRRLSFVNSIPKSASGKILRRELVTYALSAASSKL 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1135 823 SUPERFAMILY Acetyl-CoA synthetase-like 340 817 - -
Lele17g1135 823 PRINTS Adenylate kinase signature 37 50 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 PRINTS Adenylate kinase signature 114 130 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 PRINTS Adenylate kinase signature 193 208 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 PRINTS Adenylate kinase signature 65 79 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 PRINTS Adenylate kinase signature 210 224 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 FunFam Long-chain-fatty-acid--CoA ligase FadD 302 716 - -
Lele17g1135 823 TIGRFAM adk: adenylate kinase 35 245 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele17g1135 823 Pfam Adenylate kinase, active site lid 160 195 IPR007862 GO:0004017
Lele17g1135 823 Pfam Adenylate kinase 38 223 - -
Lele17g1135 823 Hamap Adenylate kinase [adk]. 34 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 CDD 4CL 308 811 - -
Lele17g1135 823 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 291 812 - -
Lele17g1135 823 Gene3D - 6 246 IPR027417 -
Lele17g1135 823 Gene3D - 717 817 IPR045851 -
Lele17g1135 823 CDD ADK 35 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele17g1135 823 Gene3D - 301 716 IPR042099 -
Lele17g1135 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 246 IPR027417 -
Lele17g1135 823 FunFam Adenylate kinase mitochondrial 34 247 - -
Lele17g1135 823 ProSitePatterns Adenylate kinase signature. 114 125 IPR033690 -
Lele17g1135 823 ProSitePatterns Putative AMP-binding domain signature. 469 480 IPR020845 -
Lele17g1135 823 FunFam 4-coumarate--CoA ligase 2 717 818 - -
Lele17g1135 823 Pfam AMP-binding enzyme 331 721 IPR000873 -
Lele17g1135 823 Pfam AMP-binding enzyme C-terminal domain 730 805 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1135 Lele-ChrLele17 21563113 21570059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1135 285 823 Monolignol Biosynthesis Gene Families AT5G63380 59.313 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1135 17 21563113 21570059 Lele31g0981 31 16988353 16992701 hybridization
Lele17g1135 17 21563113 21570059 Lele32g0542 32 3352500 3356396 hybridization