Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1131 ATGGAGTGCAACAAGGACGAGGCTCTAAGGGCTAAGCAAATTGCAGAAAGTAGACTTCAAATTTGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAGGGCCCAAAAACTGTTTCCTGAAATTGAAAACATTGTTCATATCCTTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACTTTCTGGATCTGAAATGGATTGGTATGGAATTCTTCAGATTGAACAACTGGCAGATGAAGCAACCATTAAAAAACAGTTCAGGAAGCTTGCCTTGCTACTACATCCTGATAAAAATAAGTTTTCAGGTGCAGAGGCTGCATTCAAGTTGATTGGAGAGGCAAATAGGTTGTTAAGCGACCAAGAAAAGCGGAAATTATACGACATGAAGTATAGAGCCTTCACAAGAACTGCGTCATCTAAGCCCCCATATTATAATGCAAATGGGAGTGTATTTGGCCCGAAACATGACGTACAAGCAAGAAATCATCAGAATTACTCACAACCCGCAAGTTGGAATTCCTATCAGCAGGCTGCTCAACAAACTTTCTGGACAACTTGTAGTTATTGTAAAACTAGGTATGAATACTACAGAACTGTTTTAAATGCAACCTTACGCTGTCACCAGTGTTCTAGACCCTTTGTAGCTCGTGAGATGGGATTTCAGCATGGGCCACCTGAATATAAGTGGACAACAGACCAGAAAGAATATTCAAATTTTGAATCCATGGCAAAATGCACTTATGGAGTTGATGGGCACTGTAAAGGTGGAAAGGGTGAAGATGGCAATGTGGCTGCAGGAAGGGCAAAGGTAGATGTTAGAACGTCCAAACCTGCTTCACCCAAGGTCAGGGAATCTCATTCCTCAACTCATATTGGGAGTAAGAGGAATAGGGAGTCAGTTCTGGATCCCAGAGAAAGCTGCAAGACTGAGAATGGTAACGGCGTTAAAGATGCCAATGTTCAAGGAAGTGGTATTGATCCTTCTGGACCTAAAGCAGAAGCACAGTCTAGGAGGTCTTCCAGGCAAAAGAAGGATGTTTCTTACTCTGAAACCTCCTGTGATGATGAGAGTCCTTCTAAAAGGCGCCGACAAAATGGATCATCTAGCACCATAGCAATGGAGAAAAGAGAAGAACCTGCAAGTGGTGGGTTGTCTAAACACAATCATTCAGCTAGTTCTGTAGGTCTGGGTGGTGAGAGTGGAGAGAAGACCAATAAAGCAAGTGGTCTTCCTGAAGAAATATTGTTACAGAAGAGAAGCAAAATTGAGCAATCTCATGTACATAGAGAGGAGCCATCCAAGTCCAGTGTTGACGACACAAACTCAAAAGCTGATCATTATCCTCCATTTAATTCAGCTGCCCCTTCTATTGCAGACATCATCAATTGTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAGGGCGGATAATTGTTTTGCTAAAGATCAGTTCTGGGCCATATATGATCCAAGTGATAGCATGCCAAGATACTATGCTCGTGTGAAGAAAGTGCTGTCTCCTGGATTCAAGTTGCAGATTACTTGGCTGGAGGCTGACCCAGATGATGAAGGTGAGATTGATTGGCAAGATGCAGAATTGCCTGTTGGTTGTGGTAAGTTCCGATTAGGTGACACTCAAGAAATTGAAGACCGTGCTATGTTCTCTCATCAGATGCATAATATAAAAGGAATTGGCAGAAGACGTTATATGGTATATCCTAGTAAAGAGGAAACATGGGCAATATTTAAAGATTGGGATATAAATTGGAGTTCTAATCCAGAAAAGCATTGTAAGTACGAATATGAATATGTGGAAATCCTGTCAGATTTCACAGAGAATGTTGGCATTAAAGTTGTGTATCTTGGCAAAGTGGAAGGCTTTGTTAGCCTCTTTCAGCAAACTGAGCATAGTGGACTTAGCTTATTTTGTATTCCACCTAATGAGCTCTATAGGTTCTCACATCGAATTCCTTCATTCAAAATGACTGGTGATGAAAGAGATGGTGTTCCTTGTGGATCTTTTGAGCTTGATCCCGCTGGCTTGCCTGTTGATCTTTTTGGAATTGGTAATACTGGTGATGTGGATATGGGAGATGCAATGTTAGATGATGGGGTCAAAAGTTCGGGCTACAAATCCTCTGAACAAAAAGTGGAAAATAGGAGTAATGATGTTGAAAGAGCTTCCCCAATACTTAGAAGATCACCAAGGGGGTTTAACAGAAAAGATATGAATAATGACCAAGTTAATAGAAGTCAGTATGTGACAAGAGAGAATGGCAGCAAAGACATTGGCTGCGTGGACTTAAGTCATCCTGATGGAACTGATGAGCCTAGTCATGAAGGGAAGATGCATAAGACAGACGATGTTCAAAAAGCTTCCTTAATACGCAGAAGATCACCCAGGGGATTAAAAAGCAGAAGTATGGAGAATGGTGGAGTAAATGAAAGTCAACATATGACAAGAGAGGGTGGTAGCAAATATGTAGGTTGCAAGGACTTCAGTCAACCTGAGGGAATTGCTGCTGAAGATCAGGCTGGCGAGAGGGTTAAAACACCAAAGAAACATGAGAAAAATGGTTGTGGAAGGGAAGGTTCGAATGTGCAAAGATCACCTAGAGATTTAAGCAAGAAAAAAGCCCAAGTAGATGCAAATCAATGTATGACTGGCAAGTTAAGTGGTGAACATTCAGATGCCAAAACAAAGTTGAAGGATAGCATATTTTCTGAGTCTTTCGGAGGTGTTTGCAGACCTTTCACTGAAGATTGCAGAGTTCCAAAAGCATCACGCTTTATGGTTAAATCTGAAGAAATGTTTCAGCGCGGTCAGATATGGGCATTATATGGTGATAAGGAACGGATGCCCAACACTTACGCACAAATTAAGAAGCTTGATTTTGCCCCTGATATCAGATTGCATGTGGCCTTTCTTGAACCCTGTTCACTGCCCATAGGCATAACTGGCACGGTAGCTTGTGGTGCCTTTAAGGTTAAAAATGCTAAATCCCTTGTCGTTTCCATTTCTAATTTCTCTCATCAGTTAAGACTTGAACCCAGGAAAGATAATAGATATGAAATTTATCCAAGGAAAGGTGAGATATGGGCTTTATACAAGAACCAGCATCGTGGATCAACTTGTTCAAATCAGGTGAGAGGTGATTGTCACATTGTGGAAGTGTTGGAAGATGATGATGAGAATTCAAAAGTTGTGGTTCTGATTCGTCATAACGACTCTAGGCCAATTTACAAGACTCCTGGAACTCTCAGATCTAAAAATGCTATAATTAATATACCAAGGGTGGATGCATATAGATTTTCTCACCAGATTCCTGCCTTTAAGCACACTGAAGATGGCGAGACTCATCTCAAAGGATGTTGGGAGCTTGATCCTTCATCAATTCCTGGTTTTGTAATAAATTTAGGCTGA 3429 0.4127 MECNKDEALRAKQIAESRLQICDFVGALKFATRAQKLFPEIENIVHILTVCEVHCAAQKKLSGSEMDWYGILQIEQLADEATIKKQFRKLALLLHPDKNKFSGAEAAFKLIGEANRLLSDQEKRKLYDMKYRAFTRTASSKPPYYNANGSVFGPKHDVQARNHQNYSQPASWNSYQQAAQQTFWTTCSYCKTRYEYYRTVLNATLRCHQCSRPFVAREMGFQHGPPEYKWTTDQKEYSNFESMAKCTYGVDGHCKGGKGEDGNVAAGRAKVDVRTSKPASPKVRESHSSTHIGSKRNRESVLDPRESCKTENGNGVKDANVQGSGIDPSGPKAEAQSRRSSRQKKDVSYSETSCDDESPSKRRRQNGSSSTIAMEKREEPASGGLSKHNHSASSVGLGGESGEKTNKASGLPEEILLQKRSKIEQSHVHREEPSKSSVDDTNSKADHYPPFNSAAPSIADIINCPDPDFSDFEKDRADNCFAKDQFWAIYDPSDSMPRYYARVKKVLSPGFKLQITWLEADPDDEGEIDWQDAELPVGCGKFRLGDTQEIEDRAMFSHQMHNIKGIGRRRYMVYPSKEETWAIFKDWDINWSSNPEKHCKYEYEYVEILSDFTENVGIKVVYLGKVEGFVSLFQQTEHSGLSLFCIPPNELYRFSHRIPSFKMTGDERDGVPCGSFELDPAGLPVDLFGIGNTGDVDMGDAMLDDGVKSSGYKSSEQKVENRSNDVERASPILRRSPRGFNRKDMNNDQVNRSQYVTRENGSKDIGCVDLSHPDGTDEPSHEGKMHKTDDVQKASLIRRRSPRGLKSRSMENGGVNESQHMTREGGSKYVGCKDFSQPEGIAAEDQAGERVKTPKKHEKNGCGREGSNVQRSPRDLSKKKAQVDANQCMTGKLSGEHSDAKTKLKDSIFSESFGGVCRPFTEDCRVPKASRFMVKSEEMFQRGQIWALYGDKERMPNTYAQIKKLDFAPDIRLHVAFLEPCSLPIGITGTVACGAFKVKNAKSLVVSISNFSHQLRLEPRKDNRYEIYPRKGEIWALYKNQHRGSTCSNQVRGDCHIVEVLEDDDENSKVVVLIRHNDSRPIYKTPGTLRSKNAIINIPRVDAYRFSHQIPAFKHTEDGETHLKGCWELDPSSIPGFVINLG 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1131 1142 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele17g1131 1142 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele17g1131 1142 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 845 864 - -
Lele17g1131 1142 SMART dnaj_3 66 123 IPR001623 -
Lele17g1131 1142 Gene3D DnaJ domain 52 146 IPR036869 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 386 400 - -
Lele17g1131 1142 CDD DnaJ 67 120 IPR001623 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 770 797 - -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 417 442 - -
Lele17g1131 1142 Pfam Domain of unknown function (DUF3444) 461 667 IPR024593 -
Lele17g1131 1142 Pfam Domain of unknown function (DUF3444) 924 1117 IPR024593 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 707 884 - -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 288 312 - -
Lele17g1131 1142 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 718 742 - -
Lele17g1131 1142 Pfam DnaJ domain 67 128 IPR001623 -
Lele17g1131 1142 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1135 - -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 743 760 - -
Lele17g1131 1142 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 258 459 - -
Lele17g1131 1142 MobiDBLite consensus disorder prediction 337 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1131 Lele-ChrLele17 21540388 21543816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1131 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.784 2.37e-25 107