Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele17g1118 | ATGGGGAAAATTGAACTAACGGTCACGATATCTAGTTGGGATGAATGGATCAGGCGGGCCCTCCTTCCACGAAACGACGTCGTTACTAGTATAGGAGGCGCAATAAACGAAAGAGAAGTGCAGAGAAACAGATCGCAGATATCAGAGCATCTACTGTCTTCTGTATCTTCTCCCACATCAACACTGTTGCTTATGGCGGCTGCAGCAGTAGCCGAGCCTAGGAAAGCCCCTCGACCGGGTAAGGGCGGGTTCGAAGCTCATGGCCTTTCTGAAGAGGAAGCCCGGGTTCGAGCCATTGCAGAGATCGTCAACTCTATGGTGGACCTCTCTCGGAAAGGCCAAAACGTCGACTTGAATGCGCTCAAATCCGCAGCATGTCGCAAGTATGGACTTTCACGTGCACCCAAGCTAGTGGAGATGATAGCTGCCCTACCGGAGACGGAAAAGGAGGCGCTGCTGCCGAAGCTTCGAGCCAAACCTGTCCGAACTGCCTCTGGAATAGCCGTTGTGGCTGTCATGTCCAAGCCACACCGTTGCCCTCACATAGCGACTACTGGTAATATTTGCGTATACTGCCCCGGAGGGCCTGACTCGGATTTTGAGTACAGTACTCAGTCTTACACTGGTTACGAACCAACTAGTATGCGAGCAATTCGAGCTAGGTATAATCCATATGTCCAAGCTAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCACAGTGTAGATAAGGTTGAGTTCATTTTAATGGGTGGTACTTTCATGTCCCTTCCGGCAGACTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCTGGACACACCTCTGCAAATGTTGAAGAGGCAGTTGCCTACTCTGAGCATGGTGCAACAAAATGCATTGGCATGACAATAGAAACGAGGCCAGATTATTGTCTGGGTCCTCACTTGCGGCAAATGCTTTCTTATGGTTGTACGCGATTGGAGATTGGAGTACAAAGCACATATGAGGATGTTGCTCGAGACACTAACAGAGGGCATACAGTAGCTGCTGTTGCAGATTGTTTTTGCTTGGCAAAAGATGCTGGTTTTAAGGTTGTTGCTCACATGATGCCTGATCTTCCAAATGTTGGTGTTGAGAGGGATTTGGAAAGCTTTCGGGAATTTTTTGAGAGTCCCTTGTTTAGAGCAGATGGACTTAAAATATACCCTACACTTGTAATACGTGGAACTGGGCTTTACGAGCTCTGGAAAACTGGCAGGTATAGAAACTATCCGCCTGAGCAACTGGTGGACATCGTAGCAAGGATCCTCGCCATGGTGCCCCCTTGGACCCGTGTTTATAGAGTTCAGCGGGATATTCCCATGCCTCTGGTTACTTCTGGGGTGGAGAAAGGCAATCTAAGGGAGTTAGCTCTGGCTCGGATGGAAGACCTTGGCTTGAAATGTCGTGATGTTCGGACCCGAGAAGCTGGAATCCAGGACATTCACCACCAAATCAAGCCTGAAGAGGTGGAGCTTGTGCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACATTTCTGTCGTATGAAGATACTCGACAGGATATTCTTGTTGGTTTGCTGCGTCTGCGAAAATGTGGTCGGAATACTACTTGTCCTGAACTTATGGGGAAGTGTTCTATCGTTCGTGAACTCCATGTTTATGGAACTGCCGTTCCAGTCCATGGGCGGGATGCTGACAAGCTGCAACACCAGGGTTATGGTACGCTATTAATGGAGGAAGCAGAACGAATTGCCCGCAGGGAACATAGATCAACAAAAATAGCTGTAATTTCGGGAGTAGGCACACGCCATTATTACAGGAAACTGGGGTATGAGCTTGAAGGGCCTTACATGGTGAAATATCTATCGTGA | 1884 | 0.4814 | MGKIELTVTISSWDEWIRRALLPRNDVVTSIGGAINEREVQRNRSQISEHLLSSVSSPTSTLLLMAAAAVAEPRKAPRPGKGGFEAHGLSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPETEKEALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLS | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele17g1118 | 627 | SFLD | elongater protein-like | 117 | 626 | - | - | |
Lele17g1118 | 627 | SFLD | ELP3-like | 117 | 626 | IPR034687 | - | |
Lele17g1118 | 627 | SMART | MiaB | 169 | 431 | IPR006638 | GO:0003824|GO:0051536 | |
Lele17g1118 | 627 | SUPERFAMILY | Radical SAM enzymes | 199 | 438 | - | - | |
Lele17g1118 | 627 | TIGRFAM | ELP3: radical SAM enzyme/protein acetyltransferase, ELP3 family | 114 | 626 | IPR034687 | - | |
Lele17g1118 | 627 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 435 | 622 | IPR016181 | - | |
Lele17g1118 | 627 | Pfam | Radical_SAM C-terminal domain | 393 | 472 | IPR032432 | - | |
Lele17g1118 | 627 | ProSiteProfiles | Radical SAM core domain profile. | 162 | 452 | IPR007197 | GO:0003824|GO:0051536 | |
Lele17g1118 | 627 | CDD | Radical_SAM | 176 | 423 | - | - | |
Lele17g1118 | 627 | PIRSF | HAT_Elp3 | 84 | 627 | IPR034687 | - | |
Lele17g1118 | 627 | Gene3D | - | 478 | 627 | - | - | |
Lele17g1118 | 627 | Pfam | Radical SAM superfamily | 187 | 381 | IPR007197 | GO:0003824|GO:0051536 | |
Lele17g1118 | 627 | FunFam | Elongator complex protein 3 | 475 | 627 | - | - | |
Lele17g1118 | 627 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 476 | 627 | IPR000182 | GO:0016747 | |
Lele17g1118 | 627 | Pfam | Acetyltransferase (GNAT) family | 479 | 615 | IPR000182 | GO:0016747 | |
Lele17g1118 | 627 | PANTHER | HISTONE ACETYLTRANSFERASE-RELATED | 81 | 626 | IPR039661 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele17g1118 | Lele-ChrLele17 | 21468471 | 21474272 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Lele17g1118 | Radical_SAM | 2.4e-17 | CL0036 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele17g1118 | 17 | 21468471 | 21474272 | Lele19g0441 | 19 | 2514150 | 2518440 | hybridization | |
Lele17g1118 | 17 | 21468471 | 21474272 | Lele20g1010 | 20 | 16019019 | 16024043 | hybridization |