Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1110 ATGACAACCTCTTCCCTCTCTCTGCTCTTCTTTCTCTCCTTTCTTCTCTGCATAACCCTCATTTCCTCCAGAGCACTCCCCCAAGACCCAGAATTGGTAGTACAAGAAGTGAACAGGAAGATTAATGCTTCTATGGCGAGGAGGAACTTGGGGTACCTATCCTGTGGTACAGGCAACCCCATTGATGATTGCTGGAGGTGTGACCCCGACTGGGAGAAGAACAGGCAGAAGCTAGCCGATTGTGCAATTGGGTTCGGGAAGAATGCTGTTGGGGGCAAGGACGGTCAGATTTACGTGGTGACGGACTCCGGCGACGACGACCCGGTGAACCCGAAGCCGGGGACTCTCCGATGTAGGCATGGATATTTCCATGTTGTGAACAATGACTACACCCATTGGGAAATGTATGCCATTGGTGGAAGTGCTAACCCCACCATCAACAGCCAAGGCAACAGATTTGTAGCACCCGATGACAGATTCAGCAAAGAGGTGACGAAGCATGAGGATGCGGCGGAGAGCGAGTGGAAGAACTGGAACTGGAGGTCGGAAGGGGACTTGTTGGTAAACGGTGCGTTTTTCACGGCGTCGGGAGCCGGAGCGTCGTCAAGCTATGCGAGGGCTTCGAGTCTGAGTGCGAGGCCATCTTCACTTGTGGCTACGATCACCGGAGGCGCCGGTACACTTAGCTGCCGGAAAGGTTCTCGTTGCTGA 711 0.5373 MTTSSLSLLFFLSFLLCITLISSRALPQDPELVVQEVNRKINASMARRNLGYLSCGTGNPIDDCWRCDPDWEKNRQKLADCAIGFGKNAVGGKDGQIYVVTDSGDDDPVNPKPGTLRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAAESEWKNWNWRSEGDLLVNGAFFTASGAGASSSYARASSLSARPSSLVATITGGAGTLSCRKGSRC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1110 236 Gene3D - 117 229 IPR012334 -
Lele17g1110 236 Gene3D - 58 116 IPR012334 -
Lele17g1110 236 PRINTS Pollen allergen Amb family signature 105 130 IPR018082 -
Lele17g1110 236 PRINTS Pollen allergen Amb family signature 81 98 IPR018082 -
Lele17g1110 236 SUPERFAMILY Pectin lyase-like 59 117 IPR011050 -
Lele17g1110 236 SUPERFAMILY Pectin lyase-like 115 236 IPR011050 -
Lele17g1110 236 PANTHER PECTATE LYASE 18-RELATED 117 234 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1110 Lele-ChrLele17 21410514 21411957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1110 117 236 Polysaccharide Lyase AT4G13710 77.500 1.92e-62 200