Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1102 ATGGCTCTCCCTCCTGCAAAATCACACCTCTCATTACTCTTTTCATTATTCTCTCTTTTCTTCATCCTTCATGCCAAAGTTGATATCGATCCTTCAGATCTCAAAGCTTTCTTGACTTTTCAGAAGGACTTGGGCTTCAATGGTCAACACCAACCGTTTACCGCACACCCATGCAACACCGACGGTGTGTTCTGCGAGAGGAGGCTCTCCGGCAATGAGAGCTATGCTCTCAGAATCACCAGGATCATCTTCAAGTCTAAGAAGCTTAATGGGGTTTTGTCCCCGGCGATTGGCCGTCTCTCTGAGCTCAAGGAACTTTCTCTTTCCGACAACCAGCTCGTGAGTCAAATTCCAACTCAGATAGTTGACTGTCGTAAGCTGGAAATTCTTGACCTCGGAAACAACCGCTTCTCAGGCGAGGTCCCGTCTGAATTGTCCTCCCTCATTCGCCTCCGAGTCCTTGACATATCTTCCAACAAATTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAAGTCTCTCCGTGGCGGACAATCCCTTCACCGGCAGAATTCCAGCGTCCGTACGTTCATTTCGCAATCTCCAACGCTTCAACTTTTCTGGCAATCACTTCCTTGAAATTCCTGCGCCATTGATGAAGAGATTTGGACACTCAACCTCTGATCAAATCCCCAAAAGATACATCCTTACCGAGAATTCAGCTCCAACAACAAGTCACATGACTTCTGCTCATGCTCCAAAATCCAGCAAGAACCACTCTAATATTTCAGCTGCTCCAGCTCAAGCTCCAACAGCACAACATCATGGACACAAGTCAAAGAGGAAACTAGGTGGATGGATTCTTGGATTCATAGCAGGAGCATTCGCTGGGAGCATATCTGGATTCATATTTTCTTTGATGTTCAAGTTGGCCGTTGCTTTGATCAAAGGAGGAGGGAAGAGCACGGGCCCTGCAATTTATAGTCCATTGATTAAAAAGGCAGAGGACTTAGCTTTTCTGGAGAAAGAAGATGGAATGAATTCATTAGAAATCATTGGAAGAGGTGGCTGTGGAGAAGTTTACAAGGCCGAAATACCAGGAAGCAACAAAATTGTCGCTATAAAGAAGGTCAATCAACCTTCAAAAGATGCGGCCGAACTTTCTGAAGAAGACAGTAAGGTTCTGAACAAAAAAATGCGTCAAATTCGATCCGAGATCAACACGGTAGGTCAAATTCGACACCGAAACCTTCTACCTCTTCTAGCTCATGTGTCAAGGCCCGACTGCCACTACCTTGTATATGAATACATGAAGAATGGAAGTTTACAAGATGTGCTGAATCAAGTTCAAGCAGGCATAAGAGAGTTAGACTGGGTGGCACGTCACAAGATTGCAGTCGGTGTTGCATCTGGCCTCGAGTACCTTCACATGCACCACACTCCTCGTATCATTCACAGAGATCTCAAGCCCGGAAATATTCTTCTTGACGATGATATGGAAGCTCGAATTGCAGATTTTGGGCTCGCAAAAGCAATGCCAGAAGCTTATACACATGTCTCAACTTCAAACGTGGCTGGAACTGTGGGCTACATAGCACCAGAATATCACCAGACAGTGAAGTTCACTGACAAGTGTGACATATACAGCTTTGGGGTTGTGCTTGGAATCTTGGTGATGGGAAAGATTCCATCAGATGCGTTCTTTCAGGACACAGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAATGTGATGACGTCAGACAACCCTACGAGGGCGATTGATGAAAAGCTGAGAGGGAATGGATATGAGGAACAGATGCTTCTGGTTCTGAAGATTGCCTGCTTTTGCACTCTCGATGATCCAAAGGAGAGGCCCAACAGTAAGGATATCAGATGCATGTTGTCCCAAATCAAACACTGA 1911 0.4547 MALPPAKSHLSLLFSLFSLFFILHAKVDIDPSDLKAFLTFQKDLGFNGQHQPFTAHPCNTDGVFCERRLSGNESYALRITRIIFKSKKLNGVLSPAIGRLSELKELSLSDNQLVSQIPTQIVDCRKLEILDLGNNRFSGEVPSELSSLIRLRVLDISSNKFSGNLNFLKYFPNLESLSVADNPFTGRIPASVRSFRNLQRFNFSGNHFLEIPAPLMKRFGHSTSDQIPKRYILTENSAPTTSHMTSAHAPKSSKNHSNISAAPAQAPTAQHHGHKSKRKLGGWILGFIAGAFAGSISGFIFSLMFKLAVALIKGGGKSTGPAIYSPLIKKAEDLAFLEKEDGMNSLEIIGRGGCGEVYKAEIPGSNKIVAIKKVNQPSKDAAELSEEDSKVLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGIRELDWVARHKIAVGVASGLEYLHMHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAYTHVSTSNVAGTVGYIAPEYHQTVKFTDKCDIYSFGVVLGILVMGKIPSDAFFQDTEELSLVKWMRNVMTSDNPTRAIDEKLRGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLSQIKH 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1102 636 ProSiteProfiles Protein kinase domain profile. 343 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1102 636 SUPERFAMILY L domain-like 57 215 - -
Lele17g1102 636 Pfam Protein kinase domain 345 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1102 636 MobiDBLite consensus disorder prediction 238 265 - -
Lele17g1102 636 MobiDBLite consensus disorder prediction 238 275 - -
Lele17g1102 636 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele17g1102 636 Gene3D Transferase(Phosphotransferase) domain 1 438 636 - -
Lele17g1102 636 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
Lele17g1102 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 77 635 - -
Lele17g1102 636 FunFam Leucine-rich repeat receptor protein kinase EMS1 73 168 - -
Lele17g1102 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Lele17g1102 636 SMART serkin_6 343 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1102 636 Gene3D Phosphorylase Kinase; domain 1 343 437 - -
Lele17g1102 636 Gene3D Ribonuclease Inhibitor 31 227 IPR032675 -
Lele17g1102 636 FunFam Leucine-rich repeat receptor-like protein kinase 434 636 - -
Lele17g1102 636 CDD STKc_IRAK 349 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1102 Lele-ChrLele17 21361659 21363569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1102 1 636 Receptor kinase-like Gene Family AT2G31880 62.366 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lele17g1102 Pkinase 7.4e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1102 17 21361659 21363569 Lele19g0457 19 2627189 2629099 hybridization
Lele17g1102 17 21361659 21363569 Lele20g0994 20 15910852 15914488 hybridization