Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1073 ATGGAGTCTAGAAGGGAAAGAGATCCATCAAGAGAGAAAAGAAAAATGGCATCATCAAGCTCTTACTCGTCTCCTTGCGCTGCCTGCAAATTCCTGAGAAGAAAATGCATGCCAGGTTGCATCTTCGCGCCTTACTTTCCACCCGAGGAGCCTCAAAAATTCGCCCACGTGCACAAAATCTTCGGTGCCAGCAACGTCACCAAGCTCCTCAACGAGCTCCTTCCTCACCAGAGAGAAGACGCCGTCAACTCTCTCGCCTACGAAGCAGAGGCTCGCGTGAGAGACCCAGTTTATGGCTGCGTCGGAGCCATCTCCTTCCTTCAGAGACAGGTTCAGAGGCTTCAGAAGGAGCTCGACGCTGCGAATGCCGATCTTCTCCGTTTTGCCTGCAACGAGATCCCTCCGGCTAATTCTCTCTCAATGGTGCCACCTGGTTTAGGAATCACACCTTCATCGCTTCAAGTTCAACAACTTCCTCAGAGGCCAAGGTCGACGACTATGGAGTATATCAATGGAAGAATCAGCAGTACTGAAGGAGGAGGGGGTGGGTTGTACAGGCAATTTCCTGCAGCTTATAATTGCTCTCTTCCTTATACTATTCCATGGGCTGATACAGTTTCTGATCATGGCATCGATGAGGGAGCTGCAGCAGGTGGTGGTGGAGGTAATTTGTAA 675 0.5052 MESRRERDPSREKRKMASSSSYSSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFAHVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRFACNEIPPANSLSMVPPGLGITPSSLQVQQLPQRPRSTTMEYINGRISSTEGGGGGLYRQFPAAYNCSLPYTIPWADTVSDHGIDEGAAAGGGGGNL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1073 224 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Lele17g1073 224 MobiDBLite consensus disorder prediction 1 22 - -
Lele17g1073 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 23 152 - -
Lele17g1073 224 MobiDBLite consensus disorder prediction 1 15 - -
Lele17g1073 224 Coils Coil 104 131 - -
Lele17g1073 224 Pfam Lateral organ boundaries (LOB) domain 25 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1073 Lele-ChrLele17 21224508 21225546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1073 17 210 AS2 family AT5G63090 60.406 2.14e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele17g1073 LOB 1.1e-41 No_clan