Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1068 ATGCTCCTACCAGAAACTTGTCAAGTCTGTCGTTTTCTCATATGGAAATGGCTCAAACCTTTATCCTCTGTTCTGCGTGTCTTCGGAGTTCGTAGCATCGTTGTAATGCCTGTGAACCCATGGAACCTCTTCTTCCTCTGCTTTTCTCTCTCACTTGTTCATCATTCTTTTATAGCTTTTGCGGTGAACTCGCAAGGTGAAGCTCTTATTTCATGGAAGAGAACCCTCAAGGGATCCCTGGAGGCGTTGAGCAATTGGAATCCAAATGACAGTAAACCATGTGGCTGGTTTGGAGTTACCTGTAACTCCAAAAACGAGGTTGTGAAATTAGATCTGAGGTACGTGGATTTGGTTGGGACCCTTCCTTCTAATTTCACCTCATTGCTTTCCCTGAACGAGCTAGTCCTAATGGGAACGAACCTCACTGGTTCAATTCCGAAAGAAATAGGCACTCTTGGCGAGCTCGATTACTTGGACTTGAGCGACAATGCATTGACAGGTGAAATCCCTAGTGAACTTTTCTTCTTGACAAAGCTTAAGCAACTCCATCTGAACTCAAACCAGCTCGTGGGTTCGATTCCGAATGCAATTGGGAACCTCACAGAGTTGAAGTGGCTGGTTTTATATGACAATCAACTAGGTGGCGAAGTTCCCAGAACCATTGGTTACTTGAGGAACCTGCAAGTGATCAGAGCTGGAGGAAACAAGAACCTTCAGGGCTTCTTGCCACACGAAATTGGCAACTGCACCGATTTGGTCATGTTGGGTTTGGCTGAAACTAGTCTCTCAGGTTTTCTTCCTCCAACTCTTGGCCTTCTTAAGAAGCTTGATACTCTTGCGATTTACACTTCACTTGTCTCTGGTCAAATTCCTCCCGAACTCGGTGATTGCGATGAGCTTCAGAACATTTATCTGTACGAGAATTCTCTCTCAGGATCCATACCAAGTAGACTGGGAAATCTTAGAAACCTCAAAAATCTTCTACTATGGCAGAACAATCTAGTTGGCACCATCCCACCAGAGATAGGAAATTGCTACCAGTTATCCGTCATTGACATTTCGATGAACTCACTTGTCGGAAGTATTCCCAAAAGTTTTGGAAATTTGACGTTGCTCGAGGAACTTCAACTCAGCGTCAATCAGATTTCGGGTCAGATTCCAACGGAATTGGGAAACTGTCAGCTACTCACTCACATTGAGCTGGACAACAATCTAATCACGGGTACGATACCTTCTGAGTTTGGGGACCTTAGGAATCTAACTCTGTTGTTCTTGTGGCATAACAAGCTCGAAGGAGCTATCCCATTTTTGCTTTCGAGTTGTCAAAATCTGGAAGCAGTGGATCTGTCACAGAATGGATTGACGGGTTCCATACCCAAGGGGATATTCCAGCTCAAGAATCTGAACAAGCTTTTACTACTCTCTAACAATCTCTCCGGGAATATACCCCCAGATATTGGGAACTGTTCATCTCTTATTCGGTTCCGAGCCAGCAACAATAAAATCACTGGCAGCATTCCACCAAATATCGGAAATCTGAAGAACTTGAATTTCTTGGACCTTGCAAGCAATCACATTTCTGGAGTTATTCCAGAAGAGCTCTCAGGCAGTCGGAATCTCGCATTCCTGGATCTCCATTCCAACTTGATATCTGGAAGCTTGCCGGAAAGTCTCAGCCAGCTAGGCTCGCTCCAATTTTTTGATGTCTCCGATAACATGGTTGAAGGTAAACTAAGCCCAAGACTTGGAAAGCTTGGCGAACTCACCAAACTCATTCTCAGAAAAAATCACATCTCCGGGTCAATTCCTAGTGAATTTGGTTCTTGTTCGAAGCTGCAATTACTGGACCTCAGTAGCAATGAACTCTCAGGCAAAATCCCAGGTGGTCTAGGTAACATTCCGGCGCTCGAAATCGCAATGAACCTCAGCTGGAATCAGCTCTGTGGCGAGATCCCCAGGGAGTTTTCTGCATTGAGCAAACTTGGAATTTTGGACATTTCGCACAACGAACTCAACGGAAGCCTTCAGTATCTCGAGGACCTCCAAAATCTCGTAGTCCTCAACATCTCATACAACAATCTCTCGGGTCGCGTGCCAGACAAGCCTTTCTTCTCAAAGCTTCCTCTCAGCGTCCTCGAGGGGAACCCATCGCTCTGCTTCCCCGGCAACCGATGCCCCGGAGACACTTCCAGACGATCCATTCGGCGGACAAACGCGGCGCGTGTGGCCATGGTGGTCCTTCTGTGCACCGCGTGTTTGCTTTTCCTCACAGCCTTGTACGTCGTAGTTGCAGCAAAAAGGAGTGGGTTCCCGGAGGACGGCCTGGACCTCAACGGTGGGGATAGGGACGTGGAGATGGGCCCACCTTGGGAGGTGACACTCTATCAGAAGCTAGACTTGTCAATCTATGACGTGGCGAGATGCCTGACAGTTGGCAACATAATCGGTTGTGGACGATCCGGCGTTGTTTATAGAGTAGATCTCCCGTCGGGATTAACAATCGCCGTGAAAAGGTACAGATTGTCGGAGAAATTCTCAGCCTCTGCATTCTCCTCAGAGATCGCCACGCTAGCAAGAATCCGGCACCGGAATATTGTACGGCTATTGGGTTGGGCGGCAAACCGAAAAACGAAATTACTGTTGTATGATTATTTACCTAACGGTAATTTAGATACGCTCTTGCATGAGGGCTGCACGGGATTAGTCGAATGGGAGACACGGTTGAAGATAGCATTGGGCGTGGCCGAATGCTTAGCTTATCTACACCATGACTGCGTGCCGGCCATCTTACACCGGGACGTCAAGGCGCATAACATTTTGTTGGGAGGCACATACGAACCATGTTTGGCAGATTTTGGATTTGCAAGATTGGTGGACGACGATCACAGTCCGTTTTCCGTTAATCCACAGTTCGCGGGCTCTTACGGCTATATTGCGCCGGAATATGGATGCATGGTGAGGATCAGAGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTACTGTTGGAGATAATAACGGGGAAAAGACCCCTGGACGCATCCCTGGCGGAGGAGGAGGGAGAGCACGTGATAGGGTGGGTGAGACAGAAGCTGAAGAGCAAGGAGGACCCATTGGAGATTGTGGATTCTAAGTTGAGAGGCCTTCCAGACACTGAAATCCAAGAGATGCTTCAGGCTCTTGGGATTGCTCTCTTGTGCACGAGTCAGCGTCCAGAGGATCGCCCCACCATGAAGGATGTTGCCGCATTATTGACAGAGATTCATCACGATCCTTCCCTCTCTGATCAGCCCCACAAGCCCCCCACCTCCCTTTCCCCGAAAACGACGCCTCATCCTTCCTCGTTTTCCTCCTCCTCCGCCTTGTCGCGCCTCCCGTCCTTCTCTCATTCATCCACCCTCCCCGCTTATTCTTCTTCTTCTTTCTCCTCTTGCCGTTTGGCCCCCACCTGA 3450 0.4826 MLLPETCQVCRFLIWKWLKPLSSVLRVFGVRSIVVMPVNPWNLFFLCFSLSLVHHSFIAFAVNSQGEALISWKRTLKGSLEALSNWNPNDSKPCGWFGVTCNSKNEVVKLDLRYVDLVGTLPSNFTSLLSLNELVLMGTNLTGSIPKEIGTLGELDYLDLSDNALTGEIPSELFFLTKLKQLHLNSNQLVGSIPNAIGNLTELKWLVLYDNQLGGEVPRTIGYLRNLQVIRAGGNKNLQGFLPHEIGNCTDLVMLGLAETSLSGFLPPTLGLLKKLDTLAIYTSLVSGQIPPELGDCDELQNIYLYENSLSGSIPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLVGSIPKSFGNLTLLEELQLSVNQISGQIPTELGNCQLLTHIELDNNLITGTIPSEFGDLRNLTLLFLWHNKLEGAIPFLLSSCQNLEAVDLSQNGLTGSIPKGIFQLKNLNKLLLLSNNLSGNIPPDIGNCSSLIRFRASNNKITGSIPPNIGNLKNLNFLDLASNHISGVIPEELSGSRNLAFLDLHSNLISGSLPESLSQLGSLQFFDVSDNMVEGKLSPRLGKLGELTKLILRKNHISGSIPSEFGSCSKLQLLDLSSNELSGKIPGGLGNIPALEIAMNLSWNQLCGEIPREFSALSKLGILDISHNELNGSLQYLEDLQNLVVLNISYNNLSGRVPDKPFFSKLPLSVLEGNPSLCFPGNRCPGDTSRRSIRRTNAARVAMVVLLCTACLLFLTALYVVVAAKRSGFPEDGLDLNGGDRDVEMGPPWEVTLYQKLDLSIYDVARCLTVGNIIGCGRSGVVYRVDLPSGLTIAVKRYRLSEKFSASAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDTLLHEGCTGLVEWETRLKIALGVAECLAYLHHDCVPAILHRDVKAHNILLGGTYEPCLADFGFARLVDDDHSPFSVNPQFAGSYGYIAPEYGCMVRIREKSDVYSFGVVLLEIITGKRPLDASLAEEEGEHVIGWVRQKLKSKEDPLEIVDSKLRGLPDTEIQEMLQALGIALLCTSQRPEDRPTMKDVAALLTEIHHDPSLSDQPHKPPTSLSPKTTPHPSSFSSSSALSRLPSFSHSSTLPAYSSSSFSSCRLAPT 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1068 1149 SMART serkin_6 809 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1068 1149 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 384 1079 - -
Lele17g1068 1149 SUPERFAMILY RNI-like 302 676 - -
Lele17g1068 1149 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 555 639 - -
Lele17g1068 1149 MobiDBLite consensus disorder prediction 1090 1149 - -
Lele17g1068 1149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Lele17g1068 1149 SMART LRR_sd22_2 658 683 - -
Lele17g1068 1149 SMART LRR_sd22_2 176 202 - -
Lele17g1068 1149 SMART LRR_sd22_2 513 536 - -
Lele17g1068 1149 SMART LRR_sd22_2 417 446 - -
Lele17g1068 1149 SMART LRR_typ_2 681 714 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 152 176 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 200 224 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 321 345 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 417 441 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 465 489 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 585 609 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 369 393 IPR003591 -
Lele17g1068 1149 SMART LRR_typ_2 513 536 IPR003591 -
Lele17g1068 1149 ProSiteProfiles Protein kinase domain profile. 809 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1068 1149 FunFam Putative LRR receptor-like serine/threonine-protein kinase 640 724 - -
Lele17g1068 1149 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 885 1100 - -
Lele17g1068 1149 Gene3D Ribonuclease Inhibitor 397 638 IPR032675 -
Lele17g1068 1149 Gene3D Transferase(Phosphotransferase) domain 1 885 1099 - -
Lele17g1068 1149 Gene3D Ribonuclease Inhibitor 317 396 IPR032675 -
Lele17g1068 1149 Gene3D Ribonuclease Inhibitor 61 211 IPR032675 -
Lele17g1068 1149 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 236 459 - -
Lele17g1068 1149 Pfam Leucine rich repeat 587 647 IPR001611 GO:0005515
Lele17g1068 1149 Pfam Leucine rich repeat 322 382 IPR001611 GO:0005515
Lele17g1068 1149 SUPERFAMILY L domain-like 62 335 - -
Lele17g1068 1149 MobiDBLite consensus disorder prediction 1096 1149 - -
Lele17g1068 1149 Gene3D Ribonuclease Inhibitor 639 726 IPR032675 -
Lele17g1068 1149 SUPERFAMILY Protein kinase-like (PK-like) 801 1120 IPR011009 -
Lele17g1068 1149 Pfam Leucine rich repeat N-terminal domain 63 102 IPR013210 -
Lele17g1068 1149 Pfam Protein kinase domain 811 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1068 1149 ProSitePatterns Protein kinases ATP-binding region signature. 815 837 IPR017441 GO:0005524
Lele17g1068 1149 Gene3D Ribonuclease Inhibitor 212 316 IPR032675 -
Lele17g1068 1149 Gene3D Phosphorylase Kinase; domain 1 801 884 - -
Lele17g1068 1149 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 62 235 - -
Lele17g1068 1149 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 460 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1068 Lele-ChrLele17 21197761 21202253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1068 60 1095 Receptor kinase-like Gene Family AT5G56040 54.866 0.0 1078
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele17g1068 Pkinase 9.1e-39 CL0016