Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1060 ATGAAGAAGCGTATTTTGGTCAGAGATTCTACAATGGGTAGTCTTTGGATATGCCATTTCTTTCTTCTGTTTCTGACCATACTAAATGCTTTTTTCGTCTCCAAAGTTCTTGGAGACAATGACTCAGATTCCTACTGGCTTCTTAAAATGAAATCGCAACTGGCTGACCCATTAGGAGCTCTCAAAGATTGGTCTCCAATGGTTCCTATGTGTACCTGGCATGGAGTAATATGTTCACTTGATCAGTCCCATGTTGTAGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCATGTCAGTTGAGCTCAGCCACCTCACTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACTGGTTCTATTCCTTCTGAGATTGGGATGCTACAGAATCTAAGAATACTTCGACTGTTCTCAAATTATCTATCTGGCACCATTCCTGAAGAGATAGGAAATTTGAAGAAGTTGGAGGTTCTTAGAATAGGAGACAACTTGTTGACAGGTGAAATCACACCTAGTATAGGTAACTTGAAAGAGTTGAAAGAATTGGGTTTATCTTTCTGCTATTTTAATGGAAGCATACCCACTGAGATTGGAAGCTTGAAGAATCTAGTTTCTCTTGATTTGCAGATGAACAGTTTAGGGGGCGAAATACCCAAAGAAATTCAAAGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCACCTTCTTTGGGGTCTCTTGTATCATTGCAAATTCTGAACATAGCCAATAATAGTCTCTCTGGGTCAATTCCCTCTAGCTTGAGCCTTCTCTCCAAGTTGAAATATCTGAATTTGCTTGGAAACAAACTAAGTGGGGAGGTTCCTTCAGAACTTAACAGTTTGGCCCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCGATAAACCTCGTTAATTCCGAACTAAAGAGTCTCCAAACTCTGGTTCTGTCTGATAATTTTTTGACAGGTAATATCCCAGCCAACTTCTGCTTCAGTGGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATGAACTTTCTGGTAAGTTCCCCTTGGAGTTATTCAGTTGCTCCTCACTTCAACAATTGGACCTTTCTGATAACAGCTTTGAAGGTGAACTTCCGACAACCTTGGACAAACTGCAGAACCTCACAGATCTTGCTCTCAACAACAACAGCTTCGCAGGATCTCTACCTCCGGAAATTGGAAACATTAGTACCTTGGAGGGCCTGTTCTTGTTTCACAACATGTTTACAGGAAAAATCCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAACCATATACCTTTATGATAACCAGATGTCTGGTCCAATACCAAGAGAGCTAACAAACTGCTCAAGCTTAAGGGAAATTGACTTCTTTGGGAACTATTTTTCTGGGCCCATTCCAGAGACCATAGGTAAGCTCAAGGACTTGGTTCTGCTTCATCTGAGGCAGAACAACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCCATACCACCAACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTTGAAGGACCACTTCCAGGGACACTCTTTCTTCTCAAAAACCTCAAGATCATAAATTTTTCTCATAACAGGTTCAGTGGAACCATCCTTCCTCTCACTGGTTCACATTCTCTGAATGCTTTGGACTTGACTAACAATAGCTTCTCAGGTCCCATCCCTTCAAGCTTAGTCATGTCAAGAAATCTCAGTCGTCTAAGACTTGCACATAACCAACTCACAGGAAGCATTCCATCTGAATTTGGTCAGCTCAATGAACTCAACTTCCTTGATTTGTCTTTTAACAATTTGACAGGAGAGGTGGCACCTCAACTGTCAAACTGTAAAAAGATCCAACACTTTCTACTCAGTAATAACAGATTGGGAGGGAAAATGCCTTCTTGGTTGGGAAGTTTGCAAGAACTTGGTGAGCTTGATCTCTCATTCAATGACTTCAATGGAAGCTTACCTTCTGAGCTTGGGAACTGTTCAAAATTGCTGAAGCTTTCTCTGCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTGACTTCCCTCAATGTCCTTAACTTGCAAAGCAATCATTTCTCAGGCTTCATTCCTTCATCCATTCAGCAATGCAAGAAGCTATATGAGCTCAGGCTCTCAGAAAACCTCTTCAGAGGTGATATACCAGATGAGCTTGGAGGACTTACAGAACTCCAAGTGATATTGGACTTGAGCAAAAATCTCTTATCTGGGAAAATCCCATCATCGCTGGGAAACCTCATGAAGCTAGAAAGAATCAATCTTTCTTTTAATAATCTTCATGGACAAGTTCCTCCTTCTCTTGGAAAACTAACAAGCTTGCACGTGTTGAATATCTCGTACAACCATCTCCAAGGCCAGATTCCTTCAACATTCTCAGAGTTCCCACTAAGCTCCTTCATGAACAATGACCACATGTGTGGCCCACCATTGGTATCGTGCTCAGGATCAAAAGGGCAAGATCAAGTGGTGCTGTCGAACAAGGCAGTGGCTGCAATCATAGTGGCCATTGTCTTTACTTCTACTTTGATATGCTTAGTGTTGTTGTATATTATGGTGAGAATTTGGTGTAACTGGAGGAAAGTTGCGATTTCAAGTGCAGAGGGAGGCATGGGAGAGCGAAAGAAAGAGGAAGCTAGATGGATCTATAATAGTGACAAGAAAACCAGAAATGGAGAGTATTGGAAGATGAACACTTTTGGGTTTAGTCCTTCACCGGATAAGCAGAGTCCAGAATCAACGGCTTGTGTTTTCAATCTTAAAATGAAAGCAGAAGAAATGGAAAATTCCTTGGTTTGA 2967 0.4115 MKKRILVRDSTMGSLWICHFFLLFLTILNAFFVSKVLGDNDSDSYWLLKMKSQLADPLGALKDWSPMVPMCTWHGVICSLDQSHVVGLNLSGSGISGSMSVELSHLTSLQTLDLSSNSLTGSIPSEIGMLQNLRILRLFSNYLSGTIPEEIGNLKKLEVLRIGDNLLTGEITPSIGNLKELKELGLSFCYFNGSIPTEIGSLKNLVSLDLQMNSLGGEIPKEIQSCEKLQNFAASNNLLEGDIPPSLGSLVSLQILNIANNSLSGSIPSSLSLLSKLKYLNLLGNKLSGEVPSELNSLAQLQKLDLSKNNLSGPINLVNSELKSLQTLVLSDNFLTGNIPANFCFSGSKLEQLFLARNELSGKFPLELFSCSSLQQLDLSDNSFEGELPTTLDKLQNLTDLALNNNSFAGSLPPEIGNISTLEGLFLFHNMFTGKIPVEFGRLQRLKTIYLYDNQMSGPIPRELTNCSSLREIDFFGNYFSGPIPETIGKLKDLVLLHLRQNNLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFSYLSELRTITLYNNSFEGPLPGTLFLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGPIPSSLVMSRNLSRLRLAHNQLTGSIPSEFGQLNELNFLDLSFNNLTGEVAPQLSNCKKIQHFLLSNNRLGGKMPSWLGSLQELGELDLSFNDFNGSLPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLQSNHFSGFIPSSIQQCKKLYELRLSENLFRGDIPDELGGLTELQVILDLSKNLLSGKIPSSLGNLMKLERINLSFNNLHGQVPPSLGKLTSLHVLNISYNHLQGQIPSTFSEFPLSSFMNNDHMCGPPLVSCSGSKGQDQVVLSNKAVAAIIVAIVFTSTLICLVLLYIMVRIWCNWRKVAISSAEGGMGERKKEEARWIYNSDKKTRNGEYWKMNTFGFSPSPDKQSPESTACVFNLKMKAEEMENSLV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1060 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 874 - -
Lele17g1060 988 SUPERFAMILY L domain-like 67 387 - -
Lele17g1060 988 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Lele17g1060 988 Pfam Leucine rich repeat 324 383 IPR001611 GO:0005515
Lele17g1060 988 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Lele17g1060 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 388 - -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 291 388 IPR032675 -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 487 583 IPR032675 -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Lele17g1060 988 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 389 486 IPR032675 -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 40 193 IPR032675 -
Lele17g1060 988 PRINTS Leucine-rich repeat signature 298 311 - -
Lele17g1060 988 PRINTS Leucine-rich repeat signature 109 122 - -
Lele17g1060 988 Pfam Leucine Rich Repeat 108 127 IPR001611 GO:0005515
Lele17g1060 988 FunFam Uncharacterized protein 389 484 - -
Lele17g1060 988 Gene3D Ribonuclease Inhibitor 584 879 IPR032675 -
Lele17g1060 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 197 290 - -
Lele17g1060 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 581 - -
Lele17g1060 988 SUPERFAMILY L domain-like 656 867 - -
Lele17g1060 988 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 785 919 - -
Lele17g1060 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 40 196 - -
Lele17g1060 988 SUPERFAMILY L domain-like 344 670 - -
Lele17g1060 988 SMART LRR_typ_2 778 803 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 322 346 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 250 274 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 827 850 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 682 706 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 491 515 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 130 154 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 730 753 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 539 563 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 395 419 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 106 129 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 202 226 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 634 658 IPR003591 -
Lele17g1060 988 SMART LRR_typ_2 298 320 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1060 Lele-ChrLele17 21145261 21148227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1060 56 871 Receptor kinase-like Gene Family AT5G46330 34.102 1.02e-127 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1060 17 21145261 21148227 Lele21g1781 21 25490478 25493579 CCT
Lele17g1060 17 21145261 21148227 Lele22g1757 22 22830211 22833329 CCT
Lele17g1060 17 21145261 21148227 Lele23g0226 23 1550192 1557436 CCT
Lele17g1060 17 21145261 21148227 Lele19g0499 19 2857250 2860216 hybridization
Lele17g1060 17 21145261 21148227 Lele20g0957 20 15676852 15679818 hybridization