Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1049 ATGCAGAGCTCAGCCTTCACTCTCTCCCCTTCTCTTCCTCTTCTCAAGTCTCGCTCTCGCACTCCTCCTCGCTTCGATCCCATACGCTTCTCTGCTTCTTCCTCTTTCAAACCCAATGTCGCTTGCTCCTCCGCTTCTTTCACGCGCCGATCCTGGTCCCTTGCTTCTTCCTCTTCTTCTTCTTCATCCCCTTTTCCCTTCAGGCCCTGGACATCTTTCACCACACTCTCATCCTCCGATCACGATGGATCTCCTTTTGAGGCCAGGGCCACTTCCGTGCCTGAGAGCAGCAGTGAGTCTTCCAATAATATGGCCAACACGTTGGTGCTCGGATCCTTGTTTGGTTTCTGGTACCTCTTCAATATCTACTTCAACATCTACAACAAGCAGGTCTTGAAGGTGTTTCCCTTTCCAGTCACCATCACTGCAATTCAATTTGCTGTTGGGACTGTACTTGTGTTATTTATGTGGGGTTTCAATCTATATAAAAGGCCTAAAATCAGTGGTGCCCAGCTTGCTGCAATAGTTCCACTGGCTTTGGTACATACCTTAGGGAACCTTTTCACAAATATGAGTCTTGGAAAGGTAGCCGTGTCTTTTACTCACACAATCAAAGCAATGGAACCCTTCTTCTCAGTGATCCTTTCTGCTATGTTCCTTGGAGAGTTCCCTACACCTGGGGTAGTTGCTTCCCTAATGCCCATTGTTGGTGGAGTGGCACTTGCATCAGTTACAGAGGCGTCCTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCCAATTTGACAAATCAGTCTCGCAATGTTCTCAGCAAAAAAGTCATGGTTAAGAAAGATGATTCTATGGACAATATAACGTTATTCTCAATAATAACTGTTATGTCCTTCTTCATGTTAGCCCCAGTGGCTGTATTCATGGAGGGTGTTAAAGTTACCCCTGCATATCTGCAATCTGCGGGTTTGAATGTGAAACAAGTATACATCAGATCCCTTCTTGCTGCACTGTGTTTTCATGCATATCAGCAGGTTTCTTACATGATATTACAGAGGGTGTCACCTGTTACTCACTCTGTGGGTAATTGTGTGAAGCGGGTTGTGGTCATTGTCAGCTCTGTCATCTTCTTCCAAACACCTGTTTCTCCCATTAACGCATTTGGGACTGGCATAGCTCTTGCCGGCGTTTTCCTCTATTCAAGGGTGAAACGAATTAAGCCAAAGGCCAAGACAGCGTAA 1233 0.4599 MQSSAFTLSPSLPLLKSRSRTPPRFDPIRFSASSSFKPNVACSSASFTRRSWSLASSSSSSSSPFPFRPWTSFTTLSSSDHDGSPFEARATSVPESSSESSNNMANTLVLGSLFGFWYLFNIYFNIYNKQVLKVFPFPVTITAIQFAVGTVLVLFMWGFNLYKRPKISGAQLAAIVPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEFPTPGVVASLMPIVGGVALASVTEASFNWAGFWSAMASNLTNQSRNVLSKKVMVKKDDSMDNITLFSIITVMSFFMLAPVAVFMEGVKVTPAYLQSAGLNVKQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINAFGTGIALAGVFLYSRVKRIKPKAKTA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1049 410 PANTHER SOLUTE CARRIER FAMILY 35 110 402 - -
Lele17g1049 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 244 - -
Lele17g1049 410 MobiDBLite consensus disorder prediction 1 23 - -
Lele17g1049 410 MobiDBLite consensus disorder prediction 78 102 - -
Lele17g1049 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 322 402 - -
Lele17g1049 410 MobiDBLite consensus disorder prediction 1 16 - -
Lele17g1049 410 Pfam Triose-phosphate Transporter family 109 398 IPR004853 -
Lele17g1049 410 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 108 408 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1049 Lele-ChrLele17 21085613 21088710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1049 1 410 Antiporters AT5G33320 71.875 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1049 17 21085613 21088710 Lele19g0508 19 2909834 2912948 hybridization
Lele17g1049 17 21085613 21088710 Lele20g0947 20 15619035 15622137 hybridization