Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1047 ATGGAAGAAACATTTGTTCCCTTTGAAGGGATCAAGAATGACCTCAAAGGAAGAATTGTATGCTACAAAGAAGATTGGACAAGTGGTTTCCGAGCTGGTATCAGGATTCTTGCCCCAACCACATACATATTTTTTGCTTCAGCAATTCCAGTTATTTCTTTTGGAGAGCAACTGGATAGAAATACAGATGGAACTCTGACTGCAGTGCAGACTCTTGCATCAACAGCACTCTGTGGTGTTATCCATTCAATCCTTGGAGGGCAACCTCTCCTCATTCTTGGTGTAGCCGAGCCGACAGTTCTAATGTATACCTTTATGTATAATTTTGCTAAGGATCGAAAGGATTTGGGTCACAAACTCTTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACAGCCTTGTTGCTCTTCTTGTTGGCCGTTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCATTGCTGGGGAATTATTTGGTCTGCTCATCGCAATGCTCTTTATGCAGCAGGCCATAAAGGGAGTTGTCGAAGAGTTTGGTGTACCCAAGAACCAGAGAGAAAGCACCAGTTCGATAGCACTTGAACCATCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTATTTTTACAGCACTGAAAAGTCGTAAAGCTAGATCCTGGCGCTATGGGACAGGTTGGCTTAGGGGATTTATAGCTGATTATGGAGTCCCACTATTGGTGCTAGTGTGGACTGCTGTATCTTACATACCAGTCAATGAGGTCCCAAAGGGGGTCCCTAGGCGACTATTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACAGTTATCAAGGAAATGTTGGATGTTCCTGCTGTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCAGTACTTTACTACTTTGATCACAGTGTTGCGTCACAACTTGCACAGCAGAAGGAGTTCAATCTAAGAAAACCTTCTTCCTATCATTATGATCTTCTTCTTTTGGGGTTTTTGACTTTGTTGTGTGGGCTTATCGGAATCCCTCCTTCCAATGGGGTCATTCCACAATCTCCAATGCATACAAAAAGCTTAGCTACCCTAAAACATCAGCTTCTGAGGAGAAAGCTTATATCAACTGCACGACAAAGTATGCGGAAAAATATGAACCTCAGCCAGTTGTACCACAATATGCAAGCAGCATATGATGAAATGCACACTCCGCTGGTCCATCAAATGCCACCTGAACTGAGGTTAAAAGAGCTGAAGGAGTCCACCATCCAACTTGCTTCTAGTGAAGGATATGTTGACGCCCCTGTTGATGAGATCGTGTTTGATGTGGAAAAGGATGTTGATGATCTTTTGCCTGTTGAAGTTAAAGAACAGCGCCTTAGCAATCTGCTGCAGGCATTGATGGTTGGTGGTTGTGTTGCTGCTATGCCTGTTCTAAAGAAGATACCAACTTCAGTCCTATGGGGCTACTTTGCTTTCATGGCTATAGAGAGTCTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTTTATGTTCACTGCTCCAAATCGAAGATACAAGGTGCTGGAGAAAATGCATGCAACTTTTATTGAGACTGTGCCCTTCAAAACAGTTGCCATGTTTACCTTGTTCCAAACGGCTTACTTGCTTGCATGCTTTGGTATAACTTGGATACCAATTGCCGGGGTCCTTTTCCCGTTGTTAATCATGCTTCTTGTCCCAGCACGCCAATATGTCCTTCCTATGTTTTTTAAAGGAGTACATCTTCAAGAGTTGGATGCTGCAGCCTACGAGGAAGCCCCTGCTGTTTCTTTCAACATGGCATTTGAAGATCCAAGTTGTCAAACTCAAGCAGCAACTGTCAACATTAGTGGTGGGGAAATTCTTGATGAAATTATTACAAGGAGCCGTGGGGAGATTCGTGGCATCCACAGCCCGAAAACAAGTAGTTCGACACCAACTTCATTTGGTGATATAAGACCTGCTAATAGTCCACAGCTAGTGCGAAGGATGCACAGCCCTCGAGTAACTGAATTGAGAGGGGAAAGCAGCCTAGGATCAGCCAAAAAAGAGATCATGCTAAAGCAAACTCCTAGTCCAGGGTCATCGGTTCCTAGAAAAGATACTAAAGATTCATCCTGA 2169 0.4366 MEETFVPFEGIKNDLKGRIVCYKEDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLDRNTDGTLTAVQTLASTALCGVIHSILGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGVVEEFGVPKNQRESTSSIALEPSWLFGNGMFALVLSFGLIFTALKSRKARSWRYGTGWLRGFIADYGVPLLVLVWTAVSYIPVNEVPKGVPRRLFSPNPWSPGAYSNWTVIKEMLDVPAVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRRKLISTARQSMRKNMNLSQLYHNMQAAYDEMHTPLVHQMPPELRLKELKESTIQLASSEGYVDAPVDEIVFDVEKDVDDLLPVEVKEQRLSNLLQALMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILFMFTAPNRRYKVLEKMHATFIETVPFKTVAMFTLFQTAYLLACFGITWIPIAGVLFPLLIMLLVPARQYVLPMFFKGVHLQELDAAAYEEAPAVSFNMAFEDPSCQTQAATVNISGGEILDEIITRSRGEIRGIHSPKTSSSTPTSFGDIRPANSPQLVRRMHSPRVTELRGESSLGSAKKEIMLKQTPSPGSSVPRKDTKDSS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1047 722 Gene3D Helical hairpin bin 18 60 - -
Lele17g1047 722 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele17g1047 722 MobiDBLite consensus disorder prediction 649 722 - -
Lele17g1047 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Lele17g1047 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Lele17g1047 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Lele17g1047 722 FunFam probable boron transporter 2 18 60 - -
Lele17g1047 722 MobiDBLite consensus disorder prediction 652 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1047 Lele-ChrLele17 21074103 21078241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1047 1 693 Antiporters AT3G62270 74.603 0.0 1059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1047 17 21074103 21078241 Lele21g1794 21 25604209 25605059 CCT
Lele17g1047 17 21074103 21078241 Lele23g0214 23 1431564 1432930 CCT
Lele17g1047 17 21074103 21078241 Lele19g0510 19 2920001 2924134 hybridization
Lele17g1047 17 21074103 21078241 Lele20g0945 20 15608108 15612983 hybridization