Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1032 ATGCGAGGAATCGCTCGTTGTCAGATGATAAAAGAAGACAACAAGGATGGGCGTAAGTTTTCAATTTCAGCTTCAAGGAGGGAAAAAGAAATAAGAGGAGACATGGAAACAATAATTAGAGAGAATCTTAGTGAAATGAGGTTAGCTGCGAGGAAGAAGACGAAACAGTGGTAGCATCACCTTCAAGCAGCAGTATCAATGGAAGGTGGTGGGCTACATGAATATAAGAAGGGGCTGTGGAATTCTCAGGAAGACAAGATCTTAATGGAGTACGTGAAGCAGCATGGAGTGGGCAAGTGGAACCGTATCTCTAAAGTCACAGGATTGAAGAGATGTGGCAAAAGTTGCAGGCTGAGGTGGATGAACTACCTGAGTCCGAATGTGAAGCGTGGAGATTTCTCAGAAGAAGAAGACGACCTCATTATTCGCCTCCACAATCTCCTTGGAAATAGGTGGTCACTGATAGCAGGGAGGGTGCCAGGGAGGACAGACAACCAAGTGAAGAACTACTGGAACACTCGTTTGAGCAAAAAGTTGGGTGTTAATAAAAAGGGAAAGAGCAAAGTGTGTAAACCTGCGAAGCCACCCTCTATTGAATTTAACCACGTGGCTTCTAACAATGGGTCAAATCCTTTTAAGAGGGCTTCAAACTGTAGCCAAGAGGGTGAGATTGAGAAGTTCCTCCAAGATAATTCTTTATTAAGCAAGGAGATTATTATGAGTGATGATGATTTTGAGACCACCTTCTTGTTAGCTAACAGTGGAATTGGCCTTTATGATCCTTCCTCCTTCACTGAGCCTTTCCAAGACTACTTTATTGACCTTGATTGGCCTTCCTTGTGA 843 0.4342 MRGIARCQMIKEDNKDGRKFSISASRREKEIRGDMETIIRENLSEMRLAARKKTKQWXHHLQAAVSMEGGGLHEYKKGLWNSQEDKILMEYVKQHGVGKWNRISKVTGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTRLSKKLGVNKKGKSKVCKPAKPPSIEFNHVASNNGSNPFKRASNCSQEGEIEKFLQDNSLLSKEIIMSDDDFETTFLLANSGIGLYDPSSFTEPFQDYFIDLDWPSL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1032 280 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Lele17g1032 280 Gene3D - 131 197 - -
Lele17g1032 280 Pfam Myb-like DNA-binding domain 77 124 IPR001005 -
Lele17g1032 280 Pfam Myb-like DNA-binding domain 130 173 IPR001005 -
Lele17g1032 280 CDD SANT 133 175 IPR001005 -
Lele17g1032 280 CDD SANT 80 124 IPR001005 -
Lele17g1032 280 SMART sant 129 177 IPR001005 -
Lele17g1032 280 SMART sant 76 126 IPR001005 -
Lele17g1032 280 ProSiteProfiles Myb-like domain profile. 72 124 IPR001005 -
Lele17g1032 280 Gene3D - 77 129 - -
Lele17g1032 280 FunFam MYB-related transcription factor 76 129 - -
Lele17g1032 280 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 74 206 - -
Lele17g1032 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 124 IPR017930 -
Lele17g1032 280 SUPERFAMILY Homeodomain-like 75 171 IPR009057 -
Lele17g1032 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 179 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1032 Lele-ChrLele17 20972872 20974203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1032 70 207 MYB Transcription Factor Family AT5G40330 67.857 9.24e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele17g1032 Myb_DNA-binding 7.4e-15 CL0123