LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g1031	ATGATGAAGAACTTTCACAGCTTCAAACAGATTCCAACCCCCAATAGGTCGGCAAGGAGGCTTTCGCTTGGGGAATACAAGCGAGCTTTGTCATGGTCCAAGTACTTAGTCTCTTCGGGTGCTGCCATTAAAGGAGAAGGAGAAGAAGAATGGAGTGCCGATCTGTCTCAGTTATTCATTGGATCCAAATTTGCTTCTGGAAGACACAGTAAGCTCTACAGAGGCATTTACAAGCAAAACGATGTCGCCATCAAGCTCATCAGCCAACCTGAGGAAGATGCCAACTTGGCTTCTGAGGTTGAAAAGCAATTCACTTCTGAAGTTGCTTTGCTCTTTCGTTTGCACCACCCAAACATCATCACTTTTTTTGCTGCTTGCAAGAAGCCACCTGTGTTCTGTATAATTACTGAATATATGGCCGGAGGATCCCTGAGAGGCTATCTTCATCAGCAACAACCATATTCAGTTCCACTTAATCTGGTTCTGAAATTAGCCCTAGACATTGCAAGAGGGATGCAGTATCTTCATGCTAAGGGGGTTCTTCATAGGGATCTTAAATCAGAGAACCTATTGCTTGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGAATCTCATGTTTAGAATCACAGATTGGTAGTGCAAAAGGATTCACAGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACATCATACCAAGAAAGTAGATGTTTATAGCTTCGCCATAGTCCTATGGGAGCTCTTAACTGGACTGACTCCATTCCACAACATGACACCAGAACAAGCAGCTTTTGCAGTCTCACACAAGAATGAGAGGCCGCCATTGCCAGCTGATTGTCCAAAGGCATTTAGTCATCTGATAAACAGATGCTGGTCAAGCAACCCAGATAAAAGGCCGGATTTTGATGAGATTGTTTCTATTTTGGAGATGTATAGTGAATCCCTTGAAGAAGATCCTGAGTTCTTCTCAACTTACAAACCACCTTCTTCTAATTCTCTTCTCACGAGATTCTTACCAAAATTTAGGTTGGTGAGCTCATTGCCATGGCTGGTTATTAAGATTAGCTGTTTGGTATTGGTTCTCACTGTGAATTTGGTTTCTGAAGAAGTAAAGATGCCAGGAATCCTTACAAATGGGTTTGAACATAATGAAAGAGCGAATGAAATGAACGGAAATCCTTCACCTTGTAAGGAAACCGCCTCTCCAATCAAGCCCCAAAGGAGTTCCTTTAGTTCACAAAGTCCTCAGAACACAGGTTCAAATGCACCTGCTCTACCTGTTGACACATCAATCGAGCAGCTTTATGAAAATGTCTGTGACATGGAAAGTTCTGATCACTCACCTTCCAGACAAAGTCTCGGATCTGATGGCGATGATGAGTCTGGGATCGATTCAGAATTGTGCCATCTAGTTGGAGGACCGATGAGGGAAGTGGAAATAATGGAAGAGGAAGTGGCAGAGAGGTCGAGAGGTGATTCAGTTAGTGAAACATCGTCTGGAAAAGAAACATCCGCGAATGGTGAGAAGTTAGTACAGGGGGATGAGAAGATTCAATGTGAGAAGTCCGTACCGGAGGATGAGAAGATTCAATGTGAGATGTTGGTACAGGCTGATGAGAAGATTCAATCTGCTAGTACAAGTTCTGCTTCTTCAGAAAATTCAAATGAAGTGTCAAACTCACAGGTGGACCTTGTCCCTGAAACACCGCCAAAGTCGAAACCCAAGGGAAAAGGTCCTCCCACAAAGCCTCCTACTGATAAGAGGAATGATAAACCTCTGAGAAAACAAAATAATGGATCTACTCGTGTGAAAAAATCAAAGAATTCTCATATTAGAAGGTTAATGTCACAAAATCAGAGCGGGAATTCCACTGAATCTACGACAGATAAGCCAGAGATGGGGCCAGTTTTACTAAAGCAAGCAAGAGATTTGATTTCATCAGGAGATAATCCAAGGGTGGCTCTTGAATTAGCTCTTCGAGCAATGAGATTGTTTGAGAAGTGTGCTGGTGGGAAACCAAGTTTGGAACTGGTTATGTGTCTGCATGTTACTGCGGCAATATATTCCAGCTTGGGCCAATACCATGAGGCAATACCACTTCTTGAGCACTCTATTGAAATTCCTCTGATTGAGGAAGGGCAAGATCATGCCCTTGCTAAGTTTGCTGGTCACATGCAATTGGGTGACACCTATGCAATGTTGGGCCAGCTTGAAAATTCAATCATGTGCTATAAGACAGGGTTGGAGGTCCAGAGGAAAGTCTTGGGAGAAACAGACCCAAGATTTGGCGAAACTTGTAGGTATGTGGCTGAAGCACATGTTCAAGCGTTGCAATTGGACGAAGCTGAGAGGCTCTGCCAAATGGCTCTTGACATTCATAGAGCAAACGGTTCACCCCCTACTCTTGAAGAGGCGGCTGATAGGAGGCTCATGGGCCTCATATGTGAAGCAAAAGGAAACCATGAAGCAGCTCTTGAGCATCTAATTTTAGCCAGCATGGCAATGGTAGCTAATGGCCAGGAAGTAGAAGTGGCTTCTGTTGACAGCAGCATTGGTGACACATACTTATCTTTGTCTCGGTACGATGAAGCTATTTTTGCTTATCAGAAAGCACTCACAGCTTTTAAGACCAGCAAGGGAGAGAATCATCCAGCCGTGGGATCAATCTTCGTACGTTTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCTTACTGTGAGAGTGCACTTAGAATCTATGAGAAACCTATGCCTGGGGTCCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATTTCAGCTATCTATGAGTCAATGAATGAGCTTGATCAGGCACTCAAGTTACTTCCCAAGGCACTGGAGATATATAAGGACGCCCCTGGTCGGCAAAGCACGGTTGCAGGAATTGAAGCTCAGATGGGAGTGATGCACTACATGTTGGGAAACTATTCTGAATCTTACAACACTTTGAAGAATGCTATCTCTAAGCTTCGTGCTACCGGAGAGAATAAATCAGCTTTCTTCGCCGTCGCTGTTAATCAAATGGGACTTGCTTGTGTGCAGCGCTATGCATTGGGTGAGGCTACAGAACTGTTTGAAGAAGCAAAGAATATATTGGAACAAGAGTATGGATCCTGTCACCATGAAACTCTTGGGGTGTATAGCAATCTTGCTGGCACCTATGATGCAATAGGCAGGGTGGATGAGGCAATTCAAATTCTGGAGTATGTAGTTGGAATGAGAGAGGAAAAACTTGGGACAGCGAATCCTGATGTGGATGATGAGAAAAGAAGGCTGAGTGAATTGTTGAAGGAAGCTGGCAGAGTTAGGAGCAGAACAGCCAGGTCACTTGAGACCCTTCTTGATGCCAATAATGCTCCTTCTGAAAGCAGTAATCCACAAGGGGAGGCTATCTAG	3441	0.4391	MMKNFHSFKQIPTPNRSARRLSLGEYKRALSWSKYLVSSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSKLYRGIYKQNDVAIKLISQPEEDANLASEVEKQFTSEVALLFRLHHPNIITFFAACKKPPVFCIITEYMAGGSLRGYLHQQQPYSVPLNLVLKLALDIARGMQYLHAKGVLHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFHNMTPEQAAFAVSHKNERPPLPADCPKAFSHLINRCWSSNPDKRPDFDEIVSILEMYSESLEEDPEFFSTYKPPSSNSLLTRFLPKFRLVSSLPWLVIKISCLVLVLTVNLVSEEVKMPGILTNGFEHNERANEMNGNPSPCKETASPIKPQRSSFSSQSPQNTGSNAPALPVDTSIEQLYENVCDMESSDHSPSRQSLGSDGDDESGIDSELCHLVGGPMREVEIMEEEVAERSRGDSVSETSSGKETSANGEKLVQGDEKIQCEKSVPEDEKIQCEMLVQADEKIQSASTSSASSENSNEVSNSQVDLVPETPPKSKPKGKGPPTKPPTDKRNDKPLRKQNNGSTRVKKSKNSHIRRLMSQNQSGNSTESTTDKPEMGPVLLKQARDLISSGDNPRVALELALRAMRLFEKCAGGKPSLELVMCLHVTAAIYSSLGQYHEAIPLLEHSIEIPLIEEGQDHALAKFAGHMQLGDTYAMLGQLENSIMCYKTGLEVQRKVLGETDPRFGETCRYVAEAHVQALQLDEAERLCQMALDIHRANGSPPTLEEAADRRLMGLICEAKGNHEAALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTAFKTSKGENHPAVGSIFVRLADLYNRTGKIRESKSYCESALRIYEKPMPGVPPEEIASGLMDISAIYESMNELDQALKLLPKALEIYKDAPGRQSTVAGIEAQMGVMHYMLGNYSESYNTLKNAISKLRATGENKSAFFAVAVNQMGLACVQRYALGEATELFEEAKNILEQEYGSCHHETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSRTARSLETLLDANNAPSESSNPQGEAI	1146

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele17g1031	1146	ProSiteProfiles	TPR repeat profile.	934	967	IPR019734	GO:0005515
	Lele17g1031	1146	FunFam	Serine/threonine-protein kinase isoform 1	48	140	-	-
	Lele17g1031	1146	PANTHER	PROTEIN KINESIN LIGHT CHAIN-RELATED 3	426	1132	-	-
	Lele17g1031	1146	Pfam	Protein tyrosine and serine/threonine kinase	61	312	IPR001245	GO:0004672\|GO:0006468
	Lele17g1031	1146	MobiDBLite	consensus disorder prediction	444	462	-	-
	Lele17g1031	1146	Gene3D	Tetratricopeptide repeat domain	507	725	IPR011990	GO:0005515
	Lele17g1031	1146	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	180	192	IPR008271	GO:0004672\|GO:0006468
	Lele17g1031	1146	SUPERFAMILY	TPR-like	846	966	IPR011990	GO:0005515
	Lele17g1031	1146	Gene3D	Phosphorylase Kinase; domain 1	48	140	-	-
	Lele17g1031	1146	MobiDBLite	consensus disorder prediction	584	601	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g1031	Lele-ChrLele17	20960988	20970011	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g1031	31	321	MAP Kinase Kinase Kinase	AT1G62400	65.085	2.51e-133	409

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Lele17g1031		PK_Tyr_Ser-Thr	4.1e-64	CL0016

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele21g1795	21	25607738	25610587	Lele17g1031	17	20960988	20970011	CCT
	Lele23g0213	23	1427161	1428873	Lele17g1031	17	20960988	20970011	CCT
	Lele24g1731	24	22577726	22582017	Lele17g1031	17	20960988	20970011	CCT
	Lele17g1031	17	20960988	20970011	Lele19g0526	19	3045137	3053578	hybridization
	Lele17g1031	17	20960988	20970011	Lele20g0931	20	15541531	15544756	hybridization

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