Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1023 ATGTCTGCTCGAAGGCTTTCCTCTCTGCTTTCTCGCTCTCTAGCTACTTCTCTGCTTCAATCACCAGGAAGAACCTGTGGTCGGTGGAGTAACTTCACCAGATTCAGCACTGCAGCAGCAGTTGAGGAATTAATCACTCCTCAAGTTCAGATAAGTTACACACAGCATCTAATAAATGGCCAATTTGTCAATGCTGCTTCAGGGAAAACTTTTCCGGCATATGATCCACGAACAGGAGAAGTGATTGCTCATGTTGCTGAAGGCGATGCTGAAGATATCAACCGTGCGGTGTCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCAAAAATGACCGCCTATGAAAGATGTCGGATATTGCTTCGATTTGCTGATTTGGTTGAGAAGCACAGCGATGAGCTTGCTGCTCTAGAGACATGGAACAATGGGAAGCCTTATGAACAATCACTCAAGTCTGAACTACCAATGTTTGTGCGTCTATTTCATTACTATGCTGGTTGGGCAGATAAAATCCATGGTCTGACCGTCCCTGCAGATGGAAACTACCACATTCAGGTTTTGCATGAGCCAATTGGTGTTGCAGGACAAATTATACCTTGGAACTTCCCTCTCATTATGTTTGCTTGGAAAGTTGGTCCAGCTTTAGCTTGTGGTAATACCATCGTCCTCAAGACTGCAGAGCAAACTCCCCTAACTGCTCTCTATGTGGCAAAACTATTGCACGAGGCTGGTCTTCCTCCTGGTGTTTTGAATGTGGTTTCAGGGTACGGTCCAACTGCTGGTGCGGCTCTTGCAGGTCATATGGATGTGGACAAGCTAGCATTCACTGGATCAACGGAGACAGGAAAAGCGGTGCTTGAATTGGCTGCAAGAAGCAACCTTAAGCCAGTGACGTTGGAGCTGGGAGGGAAATCACCTTTCATAGTATTTGATGATGCCGATGTTGACAAGGCCGTAGAACTTGCTCACTATGCTCTGTTTTTCAATCAGGGACAATGTTGCTGTGCTGGGTCTCGCACCTTTGTACACGAGAGAATCTATGATGAGTTCTTAGAGAAAGCAAAGGCACGTGCAATGAGACGTATCGTTGGCGATCCCTTTAAGAAAGGTGTTGAACAAGGCCCCCAGATCGACGTGGAACAATTCGAGAAAGTCCTCAGGTACATAAAATCTGGAATTGAAAGCAATGCAGCTCTTGAATGTGGAGGTCACAGAATCGGTTCAAAGGGCTTCTTCATCGAGCCAACCGTCTTCTCCAATGTTCAGGATGATATGTTGATAGCAAAGGATGAAATCTTCGGACCAGTTCAATCTGTACTGAAATTCCAGGACATTGATGAAGTAATAAGGAGATCAAATGAAACGAGGTATGGTCTTGCTGCAGGAGTGTTCACTAAGAACGGAGACATAGCCAACAGAATGATGAGAGCACTGAGAGTGGGAACGGTGTGGATTAATTGCTTCGATGTGTTCGATGCTGCGATCCCTTTTGGTGGCTACAAGATGAGTGGCATTGGCAGAGAGAAAGGAATCTATAGTCTTAACAATTACTTGCAGGTTAAAGCCGTCGTTTCGCCGTTGAAGAATCCTGCTTGGCTCTAA 1605 0.4592 MSARRLSSLLSRSLATSLLQSPGRTCGRWSNFTRFSTAAAVEELITPQVQISYTQHLINGQFVNAASGKTFPAYDPRTGEVIAHVAEGDAEDINRAVSAARKAFDEGPWPKMTAYERCRILLRFADLVEKHSDELAALETWNNGKPYEQSLKSELPMFVRLFHYYAGWADKIHGLTVPADGNYHIQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLLHEAGLPPGVLNVVSGYGPTAGAALAGHMDVDKLAFTGSTETGKAVLELAARSNLKPVTLELGGKSPFIVFDDADVDKAVELAHYALFFNQGQCCCAGSRTFVHERIYDEFLEKAKARAMRRIVGDPFKKGVEQGPQIDVEQFEKVLRYIKSGIESNAALECGGHRIGSKGFFIEPTVFSNVQDDMLIAKDEIFGPVQSVLKFQDIDEVIRRSNETRYGLAAGVFTKNGDIANRMMRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVSPLKNPAWL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1023 534 FunFam Aldehyde dehydrogenase, putative 496 522 - -
Lele17g1023 534 CDD ALDH_F2BC 51 525 - -
Lele17g1023 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 524 - -
Lele17g1023 534 Pfam Aldehyde dehydrogenase family 63 524 IPR015590 GO:0016491
Lele17g1023 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 68 524 IPR016162 GO:0016491
Lele17g1023 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Lele17g1023 534 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 58 314 - -
Lele17g1023 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Lele17g1023 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Lele17g1023 534 SUPERFAMILY ALDH-like 48 527 IPR016161 GO:0016491
Lele17g1023 534 FunFam Mitochondrial aldehyde dehydrogenase 2 306 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1023 Lele-ChrLele17 20915555 20918917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1023 1 534 Aldehyde Dehydrogenase Gene Family AT3G48000 79.182 0.0 915