Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1022 ATGAATAGATACGCAGCTTCTTCTTCGTCTCGATTATTAGGAAGCCATTTCTCCAAATCTTTCTCCCTCAGAAAGAAGGTTCCCTGGTGGTACCAAATCCTCGATCCCAAATCCGAATTCGTCGACCGATGGAATCGCACCTTCCTCTACGCCAGCTTCCTTGCACTCTTCCTCGACCCTCTCTATTTCTATTTCCCCATCATCGGCAAAGAGAATTGCATGAAAATCGACCTGGTCCTCGGCGTCTTCATCACTTTCTTCCGCACCCTCAACGATATCTTCTTTGTCTTCCACATTGTTCTCAAGTTCCGTACAGCCTACTTTTCTTCCTTCTCTTTCGGCCGCGGTGATCTCATCACTGACCCCTACCTCATCGCCATTCGCTATCTCAAGACCGATTTTAGCTTTGATTTTCTCGCATGCCTTCCTCTCCCTCAGATCGTGATTTGGTTCATAATTCCCGCATTCAAAGATTCAACAGCAGCTCATGCGAATCATACCCTTTCTCTCATGGTTCTTCTCCAGTATATTCCTCGGTTCTTTCAGATTTTCCCTCTTCAGCGCCGGATTATAAAAACCAGCGGCCTTATAGCCAAGACGGCTTTGGCAGGGTCTTTATACAATCTTGGTTTTTACATGTTGGCCAGCCATGTTTTGGGGGCTGCGTATTACGTGTTAGCGATTCAGCGCCAGTCTGAATGCTGGAGGGAAACCTGTTTGACGGAAGCCAACGCAACGCACTCTCCATCTTGTTCGCCTAAATTTCTTGACTGCGAATCACTGAGCGATCCTGCACGGGAAGCTTGGTACCAACAAACTTACCTTACTGTCGTCTGTGATGCTAAGAATGAAGACAGCCACTTCGAGTTTGGAATGTACGCGGACGCTTTCACTGCTGAACTTGCTACATCTAGGTTCATCGAAAGATACTTTTATTGCCTCTGGTGGGGCTTGAAGAGTCTATGTGCATATGGACAAAATCTTGATACAAGCGTCTTCGTTTCTGAATCTTTATTTGCGAGTTTCATCTGCATTGCAGGTCTAATTCTCTTTGCACTTCTCATTGGTAACATGCAGAACTATTGGCAATCTACTACTGCAAGACTTGAAGAATGGAGAATTAAACAGAGAGATACGGAAGAGTGGATGAGGCATCGTCAACTTCCACCAGAACTGCAAGAACGTGTACGTCGGTTTGTCCAATACAAATGGCTAGCCAGTAGAGGTGTGGATGAAGAAACTATTTTGCGTTCTTTACCTTTGGACCTTCGGCGTCAGATCCAGAGACATATTTGTCTTGCTCTCGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATGATCAGCTGCTAGATGCCATATGTGAACGCCTTGTATCCTCCCTGAACACAAAAGACACGTACTTACTAAGGGAAGGAGACCCAGTAAAAGAGATGATCTTCATCATTAGAGGACAAGTGGAGAGCTCCACCACAGATGGTGGGAGATCTGGATTCTTCAACTCTATAACCCTAAGAGCAGGTGATTTTTGTGGAGAAGAACTGCTGACGTGGGCTTTGGTCCCCACTTCTAGCAGCCTTCCATCCTCCACTCGAACCGTAAAGACCCTCACCGAATTGGAAGCATTTGCACTCAGAGCTGAAGACATGAGATTCTTTGGCATCCAATTTAAGAGGCTGCACAGCAAGAAGATTCAGCATGCTTTCAGGTATTACTCTCACCAATGGAGGGCTTGGGGGGCTTGTTTTATACAAGCTGCATGGAGGCGCCATGTGAAGAAGAAGTTGGCGATGGAGCTTTTAGAGAAAGAGAATCTGTTAGAATTAATAGAGCTGGCTGGTGAAGAATCTGCTTCTGTGGTAGTGAGCTCAACAGTGAAGGCTGCTATTGGTGGAAGCCTTGCGACTACACTTTTGGCTTCCAAGTTTGCTAAAAACACCAGAAGAGGGGCACTACGTCAGAAATTGAAAATCCCTGATGAGAGCAGCTTGAAGATGCCGAAGCTGTTTAAGCCTTCAGACCCTGACTTCTCAGCGGAATGA 2040 0.4608 MNRYAASSSSRLLGSHFSKSFSLRKKVPWWYQILDPKSEFVDRWNRTFLYASFLALFLDPLYFYFPIIGKENCMKIDLVLGVFITFFRTLNDIFFVFHIVLKFRTAYFSSFSFGRGDLITDPYLIAIRYLKTDFSFDFLACLPLPQIVIWFIIPAFKDSTAAHANHTLSLMVLLQYIPRFFQIFPLQRRIIKTSGLIAKTALAGSLYNLGFYMLASHVLGAAYYVLAIQRQSECWRETCLTEANATHSPSCSPKFLDCESLSDPAREAWYQQTYLTVVCDAKNEDSHFEFGMYADAFTAELATSRFIERYFYCLWWGLKSLCAYGQNLDTSVFVSESLFASFICIAGLILFALLIGNMQNYWQSTTARLEEWRIKQRDTEEWMRHRQLPPELQERVRRFVQYKWLASRGVDEETILRSLPLDLRRQIQRHICLALVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYLLREGDPVKEMIFIIRGQVESSTTDGGRSGFFNSITLRAGDFCGEELLTWALVPTSSSLPSSTRTVKTLTELEAFALRAEDMRFFGIQFKRLHSKKIQHAFRYYSHQWRAWGACFIQAAWRRHVKKKLAMELLEKENLLELIELAGEESASVVVSSTVKAAIGGSLATTLLASKFAKNTRRGALRQKLKIPDESSLKMPKLFKPSDPDFSAE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1022 679 Gene3D Helix hairpin bin 367 432 - -
Lele17g1022 679 Pfam Ion transport protein 44 368 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele17g1022 679 Gene3D Jelly Rolls 439 558 IPR014710 -
Lele17g1022 679 Pfam Cyclic nucleotide-binding domain 464 550 IPR000595 -
Lele17g1022 679 CDD CAP_ED 441 571 IPR000595 -
Lele17g1022 679 SUPERFAMILY Voltage-gated potassium channels 36 363 - -
Lele17g1022 679 FunFam Cyclic nucleotide-gated ion channel 1 368 432 - -
Lele17g1022 679 SMART cnmp_10 441 571 IPR000595 -
Lele17g1022 679 Gene3D - 64 364 - -
Lele17g1022 679 ProSiteProfiles cAMP/cGMP binding motif profile. 441 526 IPR000595 -
Lele17g1022 679 FunFam Cyclic nucleotide-gated ion channel 1 439 556 - -
Lele17g1022 679 SUPERFAMILY cAMP-binding domain-like 370 561 IPR018490 -
Lele17g1022 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1022 Lele-ChrLele17 20906871 20909588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1022 32 676 Ion Channels AT3G48010 63.095 0.0 874