Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1021 ATGTTTTTTGCCCGTTCCTGTTCATACCAACTTTTCATTTTTCCACCTCCATTTTTGTTTCCTGGTTCTCTTTCATGGGTCTGTTTGGTAGCCGAGAAACTGAACAAGTGTGAAATTCCTGTACAGTCACTGGAATTCTTTCTATTTATAGCAGTTCCATTCTTTCAAGGTAAATGCACACTCTTCTCTGTTTTTCGCATTTCGAGCTGTTTGTTTGGAAAGCGAAAAAATTTATCCTTCTCTTGGAATAGCGAAACCCGGATTCTGTTCTCAAGTGTAATGCTTTCCGGTTCACGGCCTCCATATGATAAGCCAGCTGGATATTCGTGGAACGCTAGTTCTTTCTGTTCTTTGAGTCAATTTTTCAAAGATCATCATTTGTTGATCTACATAAAGATGGTGCTCGGGCCATTAATTAGTCTGTTTGACTTCATTAGAGGAGTAAATTCAAGTTCCCCTGAATCTTCTAGAATTCTACCGGGAGTTATGAATGATTCAGGAATTATGTTTAATGATGGCGATTATAATTCATATGATTCCTCATCAGGAGACAGGAAAAGGATAATCATAGTAGCGAATTTTCTTCCTCTCAATGCTCACCAAGATGATTCTGGCAAGTGGTTCTTTAGCTATGATGAAGACTCGATTGTGTTACAACTAAAGGATGGTACCTCTCACGATATTGATGTTTTCTATGTTGGATCTCTGCCAATTGATGTTCAAGAAAGCAAGCAAAAGCAAGTTTCTCTTGAGTTGCTGGAGGAATTCAAGTGCTTGCCTGTGTTTATTCCTCCAGACATCCGCAAAAAGTATTACAGTGGATTCTGCAAGCAGTATTTATGGCCTCTATTCCATTACATGATGCCCATGAATCTGGCTTATGGCAATCGCTTTGATAAGTTACTTTGGAGAGCTTATGTTTCTGTTAATGTAAAATTTGTGGACGAGGTCATCGAAGCTGTTAATGATGTAGGAGAAGATTATCCTACTGGAGTTCAAATTTTGAAAGCTCTGCTTGATTCAGATTTAATAGGCTTTCAAACATTTGAATATGCTCGCCATTTTTTGTCTTGCTGCAGTAAGATGCTTGGCTTGGAATATGAATCCAAAGGGATTACATTGAGATGGAATACTTTGGCCGAAAGAGAAATCCGTGAGAAGTTTGAGGGGAAAACTCTCATTCTTGGTGTTGATGATTTGGACATATTCAAAGGCATTGGTCTAAAGCTCTTGGCAGTGGAACAACTCCTACTGAAGAGGCCATCTTTGCGACGTGAATTAGTTGTTGTCCAAATTTTGAATCCCCCAAGGAGAACTGGCAAAGATGTTGAGGAAGTAAAGAGACAGATATACCTTACTGCTGAAAGGATATACAGAATATTTGGTTTCACGGGTCATAAACCCGTTATTATAATTGATCATCCGACTCCTTTTTACGAGAAGGCAGCTTATTTTGCTTTGGCTGAATGTTGCATTGTTAATGCAGTGAGGGATGGTATGAATTTAGTTCCTTACATGTATATTGCCTACAGGCAGGGGACTCCAGAGATGGATCAAGTATTAGAAATTGGTTCTGAGTCACTTCATACGAGTGCGCTTGTCGTTTCTGAGTTCATAGGCTGCTCACTATCTCTCAGTGGGTCTTTCAGGGTGAATCCTTGGGACATAGATGCTGTGGCTGAAGCAATAAATAGAGCATGTTGTCTCTGCCTACGAAAAACTAGTTGCAGGGCAATATTTTTGGACTATGAGGGTACAATTGTTCACAAAACTTCCATTGTGAAAAGCCCTAGTCCTGAACTCATATCTGCTATCAATGACCTCTGCAATGACCCGAAGAACACCGTGTTTATAGTAAGTGGCAGAGGCAAGACCCAGGTAAGTGATTGGTTTGATTCATGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGATAAAAATTCAAGCTGGGAAACCAGTGATTCAGTCACTGGTTTTTCTTGGAGACGCAATATCGAACCTGAAATGCTATCTTTTGGTTCTGATTATGAAAATTCTGAAGCCAACAAGGAGCTGTTGGATCACCCTGAAGGTGTTCTTGCGAATGAACCTGCAGTTGTTGGAAAGGTATTGAAACACCATGAGGATGATGATGATGATGATGATGGCCAATAA 2169 0.3993 MFFARSCSYQLFIFPPPFLFPGSLSWVCLVAEKLNKCEIPVQSLEFFLFIAVPFFQGKCTLFSVFRISSCLFGKRKNLSFSWNSETRILFSSVMLSGSRPPYDKPAGYSWNASSFCSLSQFFKDHHLLIYIKMVLGPLISLFDFIRGVNSSSPESSRILPGVMNDSGIMFNDGDYNSYDSSSGDRKRIIIVANFLPLNAHQDDSGKWFFSYDEDSIVLQLKDGTSHDIDVFYVGSLPIDVQESKQKQVSLELLEEFKCLPVFIPPDIRKKYYSGFCKQYLWPLFHYMMPMNLAYGNRFDKLLWRAYVSVNVKFVDEVIEAVNDVGEDYPTGVQILKALLDSDLIGFQTFEYARHFLSCCSKMLGLEYESKGITLRWNTLAEREIREKFEGKTLILGVDDLDIFKGIGLKLLAVEQLLLKRPSLRRELVVVQILNPPRRTGKDVEEVKRQIYLTAERIYRIFGFTGHKPVIIIDHPTPFYEKAAYFALAECCIVNAVRDGMNLVPYMYIAYRQGTPEMDQVLEIGSESLHTSALVVSEFIGCSLSLSGSFRVNPWDIDAVAEAINRACCLCLRKTSCRAIFLDYEGTIVHKTSIVKSPSPELISAINDLCNDPKNTVFIVSGRGKTQVSDWFDSCENLGIAAEHGYFIRWDKNSSWETSDSVTGFSWRRNIEPEMLSFGSDYENSEANKELLDHPEGVLANEPAVVGKVLKHHEDDDDDDDGQ 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1021 722 Gene3D Glycogen Phosphorylase B; 326 381 - -
Lele17g1021 722 CDD GT20_TPS 187 566 IPR001830 GO:0003824|GO:0005992
Lele17g1021 722 Gene3D Glycogen Phosphorylase B; 382 577 - -
Lele17g1021 722 Gene3D Glycogen Phosphorylase B; 174 325 - -
Lele17g1021 722 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 328 372 IPR001830 GO:0003824|GO:0005992
Lele17g1021 722 Pfam Glycosyltransferase family 20 382 568 IPR001830 GO:0003824|GO:0005992
Lele17g1021 722 Pfam Glycosyltransferase family 20 187 323 IPR001830 GO:0003824|GO:0005992
Lele17g1021 722 Pfam Glycosyltransferase family 20 329 371 IPR001830 GO:0003824|GO:0005992
Lele17g1021 722 SUPERFAMILY HAD-like 577 682 IPR036412 -
Lele17g1021 722 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 576 690 - -
Lele17g1021 722 Pfam Trehalose-phosphatase 580 685 IPR003337 GO:0003824|GO:0005992
Lele17g1021 722 Gene3D - 578 692 IPR023214 -
Lele17g1021 722 FunFam Alpha,alpha-trehalose-phosphate synthase 375 579 - -
Lele17g1021 722 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 187 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1021 Lele-ChrLele17 20900964 20905770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1021 543 707 Trehalose Biosynthesis Gene Families AT1G23870 47.059 3.85e-39 153