Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1020 ATGGGTCAAAATCGAAATCGAAGTCCTGTGTCGGTACTCTTCATGGTGGTGGTGTTTTCGTTTCTTCCAATGGCTTATACAGAGGATGAAGAAGTGAAGCAGGCAATGGTAAGATTCATGGAGAAACTTGAACCAAGGAATATACCAAGAGATATGAACTGGGGTTGGAACTTATCTTCAGATCCTTGCATTGACGAATGGTATGGAGTTCAATGTTATTCAGGAGCAAAAATTGTGAAGAATATAATTCTTGAGGATTCTGGTTTCACAGGGATTTTAGACTCTACTTCTCTCTGCACACTTCAGCTTCTTCAAAGCCTTAGCTTGAAGAACAACAACTTACATGGCATCATACCAGAAGAAATAGGAATGTGCAAAGCATTGAGTCTTTTGTATTTAAGTGGCAATAATTTCTACGGCGACCTTCCTCTTTCTATTTCACAGTTAGGTAATCTGAAAAGGATCGATGTTTCAGATAACAACTTCTCCGGTGACCTTCCTGATATGAGTCATATTACAGGGTTAGTATCTTTTCGAGCCCAGAATAACGAATTCACAGGGGAAATTCCCAACTTCGTTTTCTCCAACCTGCAAGAGTTCAATGTCTCCAACAACAATTTACAGGGTCCAATTCCTGACGTGATAATAAGCTTGTTTGGAGCAGACAGCTTTTCTGGTAATCCCAACTTATGTGGACCCCCACTTGAAAAAACATGTCCTCCATTTCCTCCTCCTCCTCCTACACAAAAGAAGAAAAGTAGAAAACTTTTCAGTCGAAGATTGACCGCTTATTCTGGGTACGTGATTCTTGGTGTGGTTGTCCTGTTTTACTTGGCATTCAAGATTGTCAAGCGTTACAGAGCCAGAAAGAAGCCATTGAATGCTGTTGAGAAGGAAGTAATAACAGAGGAAGCTAGCAAGGAGGAGAAGGCTCTAGAACCTTCCAATGAAGTGAGTGGGATTAATGTAACGAGATCAGAGTATTCAGTGCCATCTATTGAGACAGGGATGGTGTCATCAAATCTGGTTGTTCTTATGAGTCCAGTGGTTAGGGCTCTGAAATTTGAGGACTTGCTGAGAGCTCCTGCAGAATTGGTAGGCAGAGGGAAACATGGAAGTTTGTACAAGGTGATGCTTGACAGTGGGGTGGTTTTAGCAGTGAAGAGAATCAAAGATTTGGGGATTTCAAAACAGGATTTTGATAATAGGATGCACAAATTAAACCAAGTGAAGCATCCCTGTGTTCTTCCTCTTCTTGCATTTTATTGCTCCCTTCAAGAGAAGCTTTTGGTCTATGAGTTTCTGCATAATGGTAGCCTCTTCAAGATGCTCCGTGGATCTCAAAGTGGCAAAACTACTTTTGATTGGGGAAACCGACTGAATGTTGCAGCCAACATAGCAGAAGCCTTAGCCTACATGCACGAGGAGCTTCGTGAAAGTGGCATAGCTCACGGCAACTTGAAATCCAGCAACATATTGTTCGACAAGAACATGGATCCATGCTTAAGCGAATATGGATTAATGGTCGTTGAAAATCAAGACAAATCTATCTTTAGCGGCAAGAATAACAAAAATAGCAGAAATCCCACTTCTGGTGCTGCTGGATCTGAAGCTTATAGCACCTTCAAGGTTGACACTTTTGCATTTGGGGTGGTTCTTCTTGAACTCTTGACAGGAAGAGTGATTCAGAATAACAGTAATGGGTTTGATCTGGTTCGATGGGTTAACTCAGTGGTGAGAGAGGAATGGACAGGGGAAGTATTTGATAAGTGTTTGATGACAGAGGAAGCTAATGAAGACAGGATGATGAGTTTGTTGCAGATAGCTTTGAAATGTGTGAGTGATGATCCGAATGAGAGACCAAGTATGAGTGAAGTTGCAGTAGTGACGATTTCTTTGAAAGAGGAAGAAGACAGATCCATAGCCTTTAACCCCTAA 1938 0.4154 MGQNRNRSPVSVLFMVVVFSFLPMAYTEDEEVKQAMVRFMEKLEPRNIPRDMNWGWNLSSDPCIDEWYGVQCYSGAKIVKNIILEDSGFTGILDSTSLCTLQLLQSLSLKNNNLHGIIPEEIGMCKALSLLYLSGNNFYGDLPLSISQLGNLKRIDVSDNNFSGDLPDMSHITGLVSFRAQNNEFTGEIPNFVFSNLQEFNVSNNNLQGPIPDVIISLFGADSFSGNPNLCGPPLEKTCPPFPPPPPTQKKKSRKLFSRRLTAYSGYVILGVVVLFYLAFKIVKRYRARKKPLNAVEKEVITEEASKEEKALEPSNEVSGINVTRSEYSVPSIETGMVSSNLVVLMSPVVRALKFEDLLRAPAELVGRGKHGSLYKVMLDSGVVLAVKRIKDLGISKQDFDNRMHKLNQVKHPCVLPLLAFYCSLQEKLLVYEFLHNGSLFKMLRGSQSGKTTFDWGNRLNVAANIAEALAYMHEELRESGIAHGNLKSSNILFDKNMDPCLSEYGLMVVENQDKSIFSGKNNKNSRNPTSGAAGSEAYSTFKVDTFAFGVVLLELLTGRVIQNNSNGFDLVRWVNSVVREEWTGEVFDKCLMTEEANEDRMMSLLQIALKCVSDDPNERPSMSEVAVVTISLKEEEDRSIAFNP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1020 645 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Lele17g1020 645 ProSiteProfiles Protein kinase domain profile. 360 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1020 645 PANTHER OS05G0588300 PROTEIN 13 629 - -
Lele17g1020 645 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Lele17g1020 645 Gene3D Transferase(Phosphotransferase) domain 1 435 640 - -
Lele17g1020 645 SUPERFAMILY L domain-like 49 235 - -
Lele17g1020 645 Pfam Protein kinase domain 364 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1020 645 Gene3D Phosphorylase Kinase; domain 1 337 434 - -
Lele17g1020 645 SUPERFAMILY Protein kinase-like (PK-like) 364 627 IPR011009 -
Lele17g1020 645 Gene3D Ribonuclease Inhibitor 195 237 IPR032675 -
Lele17g1020 645 FunFam Nuclear pore complex protein NUP107 29 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1020 Lele-ChrLele17 20897626 20900129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1020 56 626 Receptor kinase-like Gene Family AT1G68400 35.645 3.50e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele17g1020 Pkinase 2.1e-26 CL0016