Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1009 ATGGAATCCAACGCTAAGAATTTAAGGGACATGCTTTTGGCTAATAGCAAAGATACCAATGGTAGCCTGATGCTGCTTCAGATCAAGGGATTGCTGAGGTTTGACTTTTGTCGCATTTTGACTGTGAAGACGAGAAGTTTCTGGGAACAGGACACAATAAGCCGCCCACCTCCCAACCTTCCATCCAACAGGATATCATCTGATCTGGTTGGAGAAGACATGGAAGGGAACAGCTCTTACGGCACATCGTGGGCTGACCAGTGGGACAATGGCCCAGACCCGGTGGCCGTCGACGCCAACAACAACCACACCGGAACCGCCAAATACAAGCAAAAGGTCGGAGATGGACTCGAGAAGACCAAAACTGTCGCCAAAACTGGCATGTCCAAGCTGAAGGGGGCTAGTTCTCTAGAAATGGCGATCCCAGTGCCCAACCGATTGTTGTTCATTGACGGCGAGTGGAAAGAGCCAGTTCTCAAGAAACGAATTCCCATCATCAACCCCTCCACTGAGGAAAAAATTGGTGATATTCCGGCTGCCACCTCGGAAGATGTGGAGCTTGCAGTGGCTGCTGCTAGAAGAGCCCTCACCCGGAACAAAGGCTCGGATTGGTCAACGGCTTCCGGGTCGGTTCGGGCTCGCTATCTGCGAGCTATTGCTGATAAGGTTAAAGATAGAAAGGATGAACTAGCAAAACTCGAAGCATTAGACTGTGGAAAACCACTAGAAGAAGCAGCGTGGGACATTGATGATGTTGCTGGCTGCTTTGAGTACTATGCTGACCTTGCTGAAGGTTTGGATGCAAAGCAAAAGGCTCCTGTATCTCTTCCCATGGATACCTTCAAGTCTTATGTTCTTCATGAGCCCATTGGGGTTGTAGGATTAATTACTCCCTGGAATTATCCCATGTTAATGGCTACATGGAAGGTTGCTCCAGCTCTGGCTGCTGGTTGTACTGCAATATTAAAGCCTTCCGAATTGGCATCCATAACCTGTTTGGAGCTGGCTGATATCTGTAGAGAAGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTCACTGGATTAGGCCATGAAGCTGGTGCTCCTTTGGCATCCCATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCTGCAACCGGGAGCAAGATTATGACAGCTGCAGCTCAACTGGTGAAGCCTGTTTCACTAGAGCTTGGTGGGAAAAGCCCACTCATTGTTTTTGAGGATGTTGACCTAGATAAGGCTGCTGAATGGGCCATCTTTGGCTGTTTCTGGACAAATGGTCAAATATGCAGTGCAACATCCCGTCTTATTGTACATGAACGCATAGCGACAGAATTTCTGAATAGAATGGTGAAGTGGATAAAAAATATGAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAGGGACAGTATGAAAAGATATTGAAGTTCATTGAAACTGCCAAAAGAGAGGGTGCAACAATTTTGACTGGTGGGTCCCGCCCTGAGCATTTAAAGAAGGGATTTTTCGTTGAACCAACTGTTATAATCGATGTGACCACCTCCATGCAAATTTGGAGAGAGGAAGTTTTTGGACCTGTTCTCGCTGTGAAAACCTTTAGTAATGAGGAAGAAGCTATTGAGCTAGCAAATGACACCCATTATGGATTAGGTGCAGCTGTAATATCTAATGATCTAGAAAGATGTGAGCGTGTAACCAAGGCTTTCCAGGCTGGGATTGTTTGGATCAATTGTTCTCAGCCATGCTTCACTCAAGCCCCATGGGGAGGCAAAAAACGTAGTGGCTTTGGTCGTGAATTAGGAGAATGGGGACTTAATAACTACTTGAACGTGAAGCAAGTCACACAGTACATCTCTGATGAACCATGGGGCTGGTACCAGAATCCTTCGAAGCTGTGA 1926 0.4683 MESNAKNLRDMLLANSKDTNGSLMLLQIKGLLRFDFCRILTVKTRSFWEQDTISRPPPNLPSNRISSDLVGEDMEGNSSYGTSWADQWDNGPDPVAVDANNNHTGTAKYKQKVGDGLEKTKTVAKTGMSKLKGASSLEMAIPVPNRLLFIDGEWKEPVLKKRIPIINPSTEEKIGDIPAATSEDVELAVAAARRALTRNKGSDWSTASGSVRARYLRAIADKVKDRKDELAKLEALDCGKPLEEAAWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMDTFKSYVLHEPIGVVGLITPWNYPMLMATWKVAPALAAGCTAILKPSELASITCLELADICREVGLPPGVLNILTGLGHEAGAPLASHPHVDKIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLIVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLIVHERIATEFLNRMVKWIKNMKISDPLEEGCRLGPIVSEGQYEKILKFIETAKREGATILTGGSRPEHLKKGFFVEPTVIIDVTTSMQIWREEVFGPVLAVKTFSNEEEAIELANDTHYGLGAAVISNDLERCERVTKAFQAGIVWINCSQPCFTQAPWGGKKRSGFGRELGEWGLNNYLNVKQVTQYISDEPWGWYQNPSKL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1009 641 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 405 596 IPR016163 GO:0016620
Lele17g1009 641 CDD ALDH_F10_BADH 165 625 - -
Lele17g1009 641 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 162 621 IPR016162 GO:0016491
Lele17g1009 641 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 150 414 - -
Lele17g1009 641 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 397 404 IPR029510 GO:0016491
Lele17g1009 641 Pfam Aldehyde dehydrogenase family 159 623 IPR015590 GO:0016491
Lele17g1009 641 SUPERFAMILY ALDH-like 143 627 IPR016161 GO:0016491
Lele17g1009 641 FunFam Betaine aldehyde dehydrogenase 401 592 - -
Lele17g1009 641 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 425 436 IPR016160 GO:0016491
Lele17g1009 641 PANTHER ALDEHYDE DEHYDROGENASE 140 640 - -
Lele17g1009 641 MobiDBLite consensus disorder prediction 74 107 - -
Lele17g1009 641 Coils Coil 216 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1009 Lele-ChrLele17 20828400 20835102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1009 139 639 Aldehyde Dehydrogenase Gene Family AT1G74920 81.836 0.0 878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1826 21 25837962 25839513 Lele17g1009 17 20828400 20835102 CCT
Lele22g1801 22 23149870 23151398 Lele17g1009 17 20828400 20835102 CCT
Lele23g0183 23 1171059 1172473 Lele17g1009 17 20828400 20835102 CCT
Lele24g1763 24 22808255 22809785 Lele17g1009 17 20828400 20835102 CCT
Lele17g1009 17 20828400 20835102 Lele19g0549 19 3179945 3184203 hybridization
Lele17g1009 17 20828400 20835102 Lele20g0901 20 15393839 15403056 hybridization