Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1003 ATGGCTGGTGGACGTGCAAGTTCTGTAAGGAACATAGTACTGAACGAAGATTGGATTAACAAGGCACTTGCTCTGTCCTTGAAGGCTCACAGATCACCGGAGAAGCCTTACCTTGTTGAAAAGATTCGCGGCGACGGTGGCGGCCCTTCGAAAGTCATAATTAGCTTCCCAGGCTGTGGATCTGTAAAGGACTGGTATTCTGAAACTCCCTTTGGAGAATCCCCAATAAATCTCACTCTCTTTCCCTCCCTTAAAAGTGTTGGCAATGATGAAGCTGCTTTAGTGAATCAATCATTTCTGCAGAGATTTGAATCCATTTTTAGAAAGTCATCTTTCACTGATGTGGTAGAGAAAGCGATTGGGAAGAAGAAGCAAATAACGTTTACAGGGCACTCCTCTGGTGCTGCAGTGGCCATTCTTGCAACCTTATGGGCATTGGACAAATACCTAACTCCAGACAATAACCAGTTCCCTCCAATTTGTCTCACTTTTGGGTCTCCCTTAATTGGTAATCACATTTTGTCTCATGCTACAAGACGAGAAGAATGGTCCAATTACTTCATGCATTTCGTCATGAAATATGATATATTACCAAGAATCCTGCTTGCTCCTCTGTCTTCACTTGAGCAAAGATTCGACCCTGCTCTTGAATTCTTCAACCCCAAATCTAAATCTTTCTTCAGGAACGAATCAATAGCAAATCAAAGTATGACTTCAGAGTTCTACTTTAATGTCATGATAAATGCAGCAAATGTTACAAGCCACGCGGCATGTAAGCTCATGGGGAACACAAATGCAGTATCAGACACGCTAGCAAATTTTATAGCTTTAAGCCCTTATAGACCTTTTGGAACATACATTTTCTGCACTGGAAGTGGGAAGCTGATTATCATAAGAAACCCAGATGCTGTTTTGCAGCTCTTGTTTTTCTCTGCTCAATTGAACGTTGAAGCAGAAGCTCCTCAAGTTGCCTACAGATGCCTGAAAGAACATTTCATCTATGATGATGAACTGAGAGAAAGCTTAGCAATGCAAAATGTGGTTTACTTAGACCAACTAGAGAATTTGCCTTTGTCTGTTGATGGACTACATGGCGATATTGCAGCAACCAACGTGGCCTTGAATGACCTTGGACTTAGCAAAAGAGCCAGGCTGTGTCTTGTGGCTGCTGGAGAGGTGGAGAAACAAAAGATCAGAAACGAGGAGCAAATCGACCTGAAGATAGCCGAACGAAATATGGAGAAACTGCAAGAATACAAGGCAATAAACGAGAGGGTGAGCTACTATGAAGCCTTCAAGCGGCAAGACCATGAAATTGACTTCCAATCAAATGTTAGCAGGCTGAAGCTGGCGAGTGTATGGGATGACATAGTTGAAAAGTTAAGAAACTATGAACTGCCAGATGAATTTGAAGCCAAGGAAGAATGGATTGACCGTGGAACCGAGTTTCGACGACTGGTGGAGCCGCTGGATGTTGCCAACTATTACCGGCATGTGAGGAACGACGTCACAGGACCATACCTGGCAGGAAAAGGGAGGCCAAGGCGATACAAATACACACAGAGATGGTTGGAGCATGCAAAGAGAAAGCCAGAAGGAGCTTACTCAGAGTCATGCTTAATGGCAGAGGTGGAAGAGCTCTGGATCAAAAGAGAACAAGGCACGCCATTTGAACAAGTTCAGGAACGTGTTCTGAAACTTGAAGGAGATATGAAACGATGGAGTGACCAAGAGGTACTCTCCAACTATGTATTGTTGGAAGGTTCGACCCTTGTGAAGTTGTGGAACCGTCTTCCAAACCAACACAAGGAAGGATCCAACATAAGAAGTCTCATATTGAGGGATTAA 1848 0.4356 MAGGRASSVRNIVLNEDWINKALALSLKAHRSPEKPYLVEKIRGDGGGPSKVIISFPGCGSVKDWYSETPFGESPINLTLFPSLKSVGNDEAALVNQSFLQRFESIFRKSSFTDVVEKAIGKKKQITFTGHSSGAAVAILATLWALDKYLTPDNNQFPPICLTFGSPLIGNHILSHATRREEWSNYFMHFVMKYDILPRILLAPLSSLEQRFDPALEFFNPKSKSFFRNESIANQSMTSEFYFNVMINAANVTSHAACKLMGNTNAVSDTLANFIALSPYRPFGTYIFCTGSGKLIIIRNPDAVLQLLFFSAQLNVEAEAPQVAYRCLKEHFIYDDELRESLAMQNVVYLDQLENLPLSVDGLHGDIAATNVALNDLGLSKRARLCLVAAGEVEKQKIRNEEQIDLKIAERNMEKLQEYKAINERVSYYEAFKRQDHEIDFQSNVSRLKLASVWDDIVEKLRNYELPDEFEAKEEWIDRGTEFRRLVEPLDVANYYRHVRNDVTGPYLAGKGRPRRYKYTQRWLEHAKRKPEGAYSESCLMAEVEELWIKREQGTPFEQVQERVLKLEGDMKRWSDQEVLSNYVLLEGSTLVKLWNRLPNQHKEGSNIRSLILRD 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1003 615 Coils Coil 557 577 - -
Lele17g1003 615 PANTHER PROTEIN EDS1-RELATED 10 612 IPR044214 GO:0006952
Lele17g1003 615 Pfam Lipase (class 3) 54 200 IPR002921 GO:0006629
Lele17g1003 615 SUPERFAMILY alpha/beta-Hydrolases 47 205 IPR029058 -
Lele17g1003 615 Gene3D alpha/beta hydrolase 37 256 IPR029058 -
Lele17g1003 615 Pfam Enhanced disease susceptibility 1 protein EP domain 415 609 IPR041266 -
Lele17g1003 615 Coils Coil 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1003 Lele-ChrLele17 20808618 20810645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1003 122 201 Acyl Lipid Metabolism Gene Families AT3G07400 36.145 7.56e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1003 17 20808618 20810645 Lele20g0897 20 15373478 15381596 hybridization