Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0998 ATGTCTTGCACGGGCGCTGCCGCCGCCTATTCCGCCGTAAGCGCCGATGGTGATGGTTCCACCGGAGAGATCATGCTGTTTGGGGTTAGAGTCGTGATCGATTCCATGAGGAAGAGCGTGAGTATGAATAATCTCTCTCAGTACGAGCATCCTCAGGACGCCGCAAACAACAATAACGGCAGCAAGGAAGATGCTCTGGCTGCCGGCTATGCCTCCGCCGATGAAGCTGCTGCTCATAATTCTGGCAGGCATCGCGAGCGTGAGCGTAAACGAGGAGTTCCGTGGACAGAGGAAGAGCACAAGCTGTTCTTGCTGGGATTGCAGAAAGTTGGAAAAGGTGATTGGAGAGGGATCTCCAGGAACTACGTGAAAACTCGGACGCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGGCGAACCAACATCAACCGCCGACGCCGCAGATCCAGCCTTTTCGATATCACCACTGACACGGTCTCTGCAATCCCAATGGAAGAAGAAGAGATCCAGCATCAAGATTATGCACTGTCTCATTCAAATCCTGTTGTATGCCCTGCAACCCCTGAAACTACCAACATAAATGGATTTTCAATGAGGCCTGTATATCCAATGGGAGTTGGTTCTGGAATGATTTCAGTCCCCGTTTCAAATCCAACAGGAACGGTGGACGGTAACGGGCAACCCCACCAGCTAGTCCGATCAATCACTGTTCTTTCACATCCTCAAGCTTCTGAAGCGTCTAATATCACATCAAGTTCAAGTTCAGCTGTTGATCCACCAACATTGTCTCTCGGGTTATCCTTGTCTTCTTCTGATCAAAGACACACTTCAACAAGGCATTCATCTATGCTTGACATGCCGTGTTTCAACAATGGAGATAACATCATAAGTGTTGCTTGA 909 0.495 MSCTGAAAAYSAVSADGDGSTGEIMLFGVRVVIDSMRKSVSMNNLSQYEHPQDAANNNNGSKEDALAAGYASADEAAAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNINRRRRRSSLFDITTDTVSAIPMEEEEIQHQDYALSHSNPVVCPATPETTNINGFSMRPVYPMGVGSGMISVPVSNPTGTVDGNGQPHQLVRSITVLSHPQASEASNITSSSSSAVDPPTLSLGLSLSSSDQRHTSTRHSSMLDMPCFNNGDNIISVA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0998 302 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Lele17g0998 302 MobiDBLite consensus disorder prediction 78 93 - -
Lele17g0998 302 SMART sant 91 141 IPR001005 -
Lele17g0998 302 ProSiteProfiles SANT domain profile. 90 143 IPR017884 -
Lele17g0998 302 SUPERFAMILY Homeodomain-like 89 144 IPR009057 -
Lele17g0998 302 FunFam transcription factor MYB1R1 93 144 - -
Lele17g0998 302 PANTHER TRANSCRIPTION FACTOR KUA1 23 246 - -
Lele17g0998 302 MobiDBLite consensus disorder prediction 245 289 - -
Lele17g0998 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Lele17g0998 302 CDD SANT 94 139 IPR001005 -
Lele17g0998 302 Gene3D - 93 145 - -
Lele17g0998 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Lele17g0998 302 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Lele17g0998 302 MobiDBLite consensus disorder prediction 73 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0998 Lele-ChrLele17 20771256 20772871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele17g0998 Myb_DNA-binding 1.6e-11 CL0123